Gene YpsIP31758_3466 details

Gene Information

• Locus tag: YpsIP31758_3466
• Symbol: dnaK
• ID: 5386780
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 3906276
• End bp: 3908186
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640866479
• Product: molecular chaperone DnaK
• Protein accession: YP_001402421
• Protein GI: 153949194
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000000000062983
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAA TTATTGGTAT CGACTTGGGT ACTACCAACT CTTGTGTAGC AATTATGGAT 
GGTACTAAAG CACGTGTGCT GGAAAACAGC GAAGGTGATC GCACAACGCC TTCTATCATC 
GCTTATACCC AAGATGGTGA AACTCTGGTT GGTCAACCGG CTAAGCGTCA GGCTGTCACT 
AACCCTCAAA ATACACTGTT TGCCATCAAG CGTTTGATTG GCCGTCGTTT CCAAGACGAA 
GAAGCACAGC GTGATAAAGA TATCATGCCG TACAAAATTA TTGCTGCAGA TAATGGTGAC 
GCTTGGCTGG AAGTTAAAGG CCAGAAAATG GCACCGCCGC AGATCTCTGC TGAAGTGCTG 
AAGAAAATGA AGAAAACGGC TGAAGATTAT CTGGGTGAAC CCGTAACTGA AGCGGTTATT 
ACCGTACCGG CTTACTTTAA CGATGCACAA CGTCAAGCAA CTAAAGATGC TGGCCGTATC 
GCCGGTCTGG AAGTAAAACG TATCATCAAC GAACCAACCG CAGCCGCACT GGCCTACGGT 
CTGGATAAAG AAGTGGGTAA CCGTACTATC GCGGTCTATG ACCTCGGTGG TGGTACTTTC 
GATATCTCAA TTATCGAAAT CGACGAAGTT GATGGCGAAA AGACCTTCGA AGTATTGGCA 
ACCAACGGTG ATACCCACTT GGGTGGTGAA GACTTCGATA GCCGTTTGAT CAACTATCTG 
GTTGAAGAAT TTAAGAAAGA CCAGGGTATG GATCTGCGTA CCGATCCACT GGCAATGCAG 
CGTTTGAAAG AAGCCGCTGA AAAAGCAAAA ATCGAGCTGT CTTCTGCACA GCAGACCGAT 
GTTAACCTGC CGTACATCAC GGCTGATGGC AGCGGTCCAA AACACATGAA CATCAAAGTG 
ACCCGCGCTA AATTGGAGTC ACTGGTAGAA GATTTGGTAA ACCGATCTAT TGAACCACTG 
AAAGTGGCTC TGCAAGATGC TGGTTTGTCT GTTTCCGACA TTCAGGACGT TATCCTGGTG 
GGTGGTCAGA CTCGTATGCC AATGGTTCAG AAGAAAGTGG CTGACTTCTT CGGTAAAGAA 
CCACGTAAAG ATGTAAACCC AGATGAAGCG GTAGCAATTG GTGCCGCTGT GCAGGGTGGG 
GTTCTGTCTG GTGAAGTGAA AGACGTTCTG TTACTGGACG TTACTCCACT GTCACTGGGT 
ATCGAAACGA TGGGTGGTGT AATGACTCCG CTTATCACTA AAAACACCAC TATCCCGACC 
AAGCACAGTC AGGTGTTCTC TACTGCTGAA GACAACCAGT CTGCGGTAAC CATCCACGTG 
CTGCAGGGTG AGCGTAAACG TGCTCAGGAT AATAAATCTC TGGGTCAGTT CAATCTGGAT 
GGTATTCAGG CTGCACCGCG TGGTATGGCG CAAATCGAAG TCACCTTCGA TATCGACGCC 
GACGGTATTT TGCATGTGTC TGCTAAAGAC AAGAATACCG GTCGTGAGCA GAAGATCACC 
ATTAAGGCCT CTTCTGGTTT GAACGAGGAA GAGATTCAAA AAATGGTACG TGATGCTGAA 
GCAAACGCAG AAGCTGACCG TAAGTTTGAA GAACTGGTTC AGACCCGTAA CCAGGCTGAC 
CATCTGATCC ACGGTACTCG TAAGCAGTTG GAAGAAGCCG GTGATAAATT ACCAGCAGAA 
GACAAAACTG CTATCGAAGA AGCAATGAAA GGCTTGGAAG CTGCACTGAA AGGTGAAGAC 
AAAGCTGAAA TCGAAGCGAA AACTCAGGCT CTGGTACAGG TTTCCGGGAA ATTGCTGGAA 
ATGGCTCAAC AGCAACAAGC TGCCGCAGGC GGTGATGCTG GTGATACCAG TGCCAAGAAA 
GAAGACGACG TTGTAGACGC CGAATTCGAA GAAGTAAAAG ACAAAAAATA A 

 

Protein sequence

MGKIIGIDLG TTNSCVAIMD GTKARVLENS EGDRTTPSII AYTQDGETLV GQPAKRQAVT 
NPQNTLFAIK RLIGRRFQDE EAQRDKDIMP YKIIAADNGD AWLEVKGQKM APPQISAEVL 
KKMKKTAEDY LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLEVKRIIN EPTAAALAYG 
LDKEVGNRTI AVYDLGGGTF DISIIEIDEV DGEKTFEVLA TNGDTHLGGE DFDSRLINYL 
VEEFKKDQGM DLRTDPLAMQ RLKEAAEKAK IELSSAQQTD VNLPYITADG SGPKHMNIKV 
TRAKLESLVE DLVNRSIEPL KVALQDAGLS VSDIQDVILV GGQTRMPMVQ KKVADFFGKE 
PRKDVNPDEA VAIGAAVQGG VLSGEVKDVL LLDVTPLSLG IETMGGVMTP LITKNTTIPT 
KHSQVFSTAE DNQSAVTIHV LQGERKRAQD NKSLGQFNLD GIQAAPRGMA QIEVTFDIDA 
DGILHVSAKD KNTGREQKIT IKASSGLNEE EIQKMVRDAE ANAEADRKFE ELVQTRNQAD 
HLIHGTRKQL EEAGDKLPAE DKTAIEEAMK GLEAALKGED KAEIEAKTQA LVQVSGKLLE 
MAQQQQAAAG GDAGDTSAKK EDDVVDAEFE EVKDKK