Gene YpsIP31758_3464 details

Gene Information

• Locus tag: YpsIP31758_3464
• Symbol: nhaA
• ID: 5388403
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 3903598
• End bp: 3904782
• Gene Length: 1185 bp
• Protein Length: 394 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640866477
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_001402419
• Protein GI: 153949836
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00000000517181
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACAAATA TCATTCGTCA ATTTTTACGC CAAGAGGCCG CAGGTGGCCT GATTCTGATT 
ATTGCTGCCG CTATTGCCCT GTTGATGGCG AACAGTGCCC TACAAGGGAT TTATCAATCA 
TTTCTTGATA TACCAGTCTC GATAAAAATA GCTTCGCTGG ATATCAGTAA ACCGTTATTG 
CTGTGGATTA ACGATGGTCT AATGGCGGTA TTTTTCCTGG TGGTAGGGCT GGAAGTTAAA 
CGTGAGTTGA TGGAAGGCTC TCTGGCGGGC CGCGATAAAG CAGTTTTTCC CGCGATTGCT 
GCATTGGGGG GGATGTTAGC CCCAGCGCTG ATTTACTTAC TGTTCAATGG TGCTGATGAG 
GTGACCCGCC AAGGGTGGGC GATCCCAGCA GCGACTGATA TTGCGTTTGC CTTGGGAGTG 
ATGGCGCTAT TAGGTAACCG GGTACCAACC GGGCTGAAGG TCTTTTTACT GGCATTAGCC 
ATTATCGATG ATCTTGGTGT CATTATTATT ATTGCGTTGT TCTATACCCA GCAGGTTTCA 
TTACAATCTT TGGGTATTGC TGCGGCTGCT ATTGCTTTAC TGGCGTATAT GAACTGGCGT 
GGTGTAGGGA AAACATCAGC TTATCTGCTG GTCGGCTTGG TTTTGTGGGT TTGTATTCTT 
AAATCGGGTG TACATGCGAC TTTGGCTGGG GTGATTGTTG GCTTTATGAT CCCGCTGCAT 
ACCCAAGACC AACGCTCTCC TTCTGAATCG CTGGAGCATG GTTTACATCC GTGGGTTGCC 
TATTTAATTT TGCCATTGTT TGCTTTTGCC AATGCGGGGG TCTCTTTACA AGGCGTTTCT 
CTTTCAGGGC TGACGTCACT GCTGCCGATG GGGATTGCAA CAGGTCTGTT TATCGGTAAA 
CCGTTGGGAA TTTTCACTTT TAGTTGGCTC GCGGTTAAGT TAGGAATTGC TAAACTGCCC 
GATGCAATAA ATTTTAAGCA AATTTTTGCA GTTTCAGTGT TGTGTGGGAT CGGCTTTACT 
ATGTCGATAT TTATCGCATC ACTGGCATTT GAAGGCACAG ATATCGCTCT GACGACCTAT 
TCCAAACTAG GGATATTGCT AGGCTCTACC ACAGCGGCTG TTGTGGGTTA CAGCTTACTG 
CGTTTGGTTT TACCCGCTCG GCGGAAGGCT GTTAACGTAA GGTAA 

 

Protein sequence

MTNIIRQFLR QEAAGGLILI IAAAIALLMA NSALQGIYQS FLDIPVSIKI ASLDISKPLL 
LWINDGLMAV FFLVVGLEVK RELMEGSLAG RDKAVFPAIA ALGGMLAPAL IYLLFNGADE 
VTRQGWAIPA ATDIAFALGV MALLGNRVPT GLKVFLLALA IIDDLGVIII IALFYTQQVS 
LQSLGIAAAA IALLAYMNWR GVGKTSAYLL VGLVLWVCIL KSGVHATLAG VIVGFMIPLH 
TQDQRSPSES LEHGLHPWVA YLILPLFAFA NAGVSLQGVS LSGLTSLLPM GIATGLFIGK 
PLGIFTFSWL AVKLGIAKLP DAINFKQIFA VSVLCGIGFT MSIFIASLAF EGTDIALTTY 
SKLGILLGST TAAVVGYSLL RLVLPARRKA VNVR