| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3457 |
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| Symbol | ispH |
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| ID | 5385912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3896005 |
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| End bp | 3896958 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866470 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001402412 |
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| Protein GI | 153950430 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.175164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATAT TGCTGGCTAA CCCACGTGGC TTTTGTGCTG GCGTTGACCG GGCTATCAGT
ATTGTTGAAC GTGCGATAGA AATGTATGGC GCGCCAATTT ATGTACGCCA TGAGGTGGTA
CATAACCGCT ATGTGGTTGA GAGCCTGTGC GAGCGCGGTG CTATCTTTAT CGAGGAAATT
TCAGAGGTGC CAGATGGCTC CATTCTGATT TTCTCGGCCC ATGGTGTGTC ACAGGCTGTT
CGGGCAGAGG CCCGTTCGCG TAATTTGACG ATGCTGTTTG ATGCGACCTG TCCATTGGTT
ACCAAAGTCC ATATGGAAGT TGCCCGTGCG AGCCGTAAGG GTAAAGAAGC TATTTTGATC
GGCCATGCAG GTCATCCAGA AGTGGAAGGG ACCATGGGGC AATACAGCAA CCCTAACGGG
GGGATGTATT TGGTTGAATC GCCTGATGAC GTTTGGCAGT TGAGCGTCAA AGATGAGAAT
AATCTGTGTT TTATGACGCA GACCACCTTA TCGGTTGATG ATACCTCCGC TGTTATCGAT
GCGTTGAACA CGCGCTTCCC AAAGATAGTC GGTCCACGCA AAGATGATAT TTGCTATGCC
ACAACCAATC GGCAAGAGGC AGTACGTAAT CTGGCAAATG ATGCCGATAT CGTCTTGGTC
GTGGGGTCGA AAAACTCCTC TAACTCTAAC CGATTGGCCG AACTGGTACA GCGAATGGGT
AAGCCCGCTT ATCTGATTGA CTCTGCGGCA GATATTCAGG AATTTTGGTT ACAGGGTGCC
AAGTGTATCG GTGTTACCGC GGGTGCATCT GCCCCCGATA TTTTGGTGCA GCAAGTGATT
GCACGCTTAA AAGATCTTGG TGCTGGTGAA TCGATTGAAC TCAGCGGTCG CGAAGAAAAT
ATTGTTTTTG AAGTACCGAA AGAACTGCGT GTTGAGGTTA AACAGATCGA CTGA
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| Protein sequence | MQILLANPRG FCAGVDRAIS IVERAIEMYG APIYVRHEVV HNRYVVESLC ERGAIFIEEI
SEVPDGSILI FSAHGVSQAV RAEARSRNLT MLFDATCPLV TKVHMEVARA SRKGKEAILI
GHAGHPEVEG TMGQYSNPNG GMYLVESPDD VWQLSVKDEN NLCFMTQTTL SVDDTSAVID
ALNTRFPKIV GPRKDDICYA TTNRQEAVRN LANDADIVLV VGSKNSSNSN RLAELVQRMG
KPAYLIDSAA DIQEFWLQGA KCIGVTAGAS APDILVQQVI ARLKDLGAGE SIELSGREEN
IVFEVPKELR VEVKQID
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