Gene YpsIP31758_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3418 
SymbolpolB 
ID5385745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3844266 
End bp3846635 
Gene Length2370 bp 
Protein Length789 aa 
Translation table11 
GC content53% 
IMG OID640866431 
ProductDNA polymerase II 
Protein accessionYP_001402373 
Protein GI153949269 
COG category[L] Replication, recombination and repair 
COG ID[COG0417] DNA polymerase elongation subunit (family B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGCAAA CCCGTCAGGG CTTCCTGCTG ACCCGCCACT GGCGGGATAC ACCAGCAGGC 
ACCGAAGTCG AATTCTGGTT GGCAACGGAT GAAGGGCCAC AGCATGTCAG GCTGCCGCCC
CAGCCATCGG TCGCCTTTAT CCCTGCCGAA CAACAGCAAC GGGCAGAAAC CGTACTACGC
GCAGAACGCC ATTGGCAACT GCGCCCTCTC GCGCTGACTG ATTTTCACCG ACGCCCGGTT
CTTGGCCTGT ATTGCACTCA GCACCGCCAG TTGATCCGCC TGGAAAAACG ACTGCGCGAA
AGTGGCGTGA ATGTTTACGA AGGTGATATT CGCCCGCCAG AACGCTTTCT GATGGAGCGG
TTTATTACTG CCCCCGTATG GTTTAGTGGG CAGGAAAATG ACCATGGCCC ACTCCTCAAT
ACACAACTAA AACCGGCTGA TGACTATCGC CCAACCCTCA AACTGGTTTC TCTGGATATC
GAAACCAGTG AACACGGCGA GCTGTACTGT ATTGGGCTGG AAGGCTGTGG GCAACGGCAA
GTCTATATGT TAGGGCCACC CAATGGGGAG ACCACGGGCA CCCCGCTCGA TTTCAATTTG
GAATACGTTG CCAGCCGCCC ATTACTATTA GAAAAACTCA ACCAATGGCT GGCAGTGCAT
GATCCTGATG CCATTATTGG CTGGAATCTG GTGCAGTTCG ATTTACGGGT ATTACAGAAA
CACGCAGATC GCTACCAGAT CCCGCTGCGC TTTGGCCGTG GCGGTAACCT GCTCGAGTGG
CGTGAACACG GCTTTAAGCA AGGGCATTTC TTTGCTTCCG CCGCCGGGCG TTTAATTATT
GATGGTATTG AAGCACTGAA ATCCGCCACG TGGAACTTCC CTTCTTTCAG TCTGGAATCT
GTCTCGCAAA CTTTACTTGG CGAGGGTAAA GCCAGCGATA GCCCCTATCA GCGGATGGAT
GAAATTAATC AGCGCTTCGC CCACGATAAA CCAGCACTGG CCCGTTATAA CCTGAAAGAC
TGTGAGTTGG TCACGCGGAT TTTTGCCAAA ACGGAGTTGC TGAGTTTCTT ACTTGAACGC
TCAACCGTGA CCGGGCTGGC AGCCGATCGC AGTGGCGGTT CGGTGGCCGC GTTTACCCAC
CTTTATCTGC CACGGATGCA CCGTATCGGC TATGTTGCCC CCAATTTAGG TGAATTGCCG
GAAGAGCACA GCCCCGGTGG TTTTGTAATG GATTCCCAGC CCGGTTTGTA TGATTCAGTG
CTGGTACTTG ATTATAAAAG CCTGTACCCA TCGATTATCC GCACCTTTTT AATCGATCCG
GTCGGTCTGG TGGCGGGGAT GCAACAACCT GATATTCAGC ACTCGGTACC GGGGTTTCGT
GGGGCCTGGT TCTCACGCGA GAAACATTGT CTGCCCGCCA TTGTTAACCA AATCTGGCAA
GGGCGGGAAG CAGCGAAACG CCAGCAAAAT AAGCCGCTGT CACAAGCGCT GAAAATCATT
ATGAATGCCT TTTATGGCGT GCTGGGTTCC AGCGGCTGCC GTTTTTTCGA TCCTCGGCTG
GCATCATCCA TTACCCTGCG TGGTCATGAG ATCATGCGAC AAACCCGTGA GTTAATTGAA
GCGCAGGGTT ATCAGGTGAT TTATGGTGAC ACCGATTCAA CCTTTGTTTG GCTGAAAAGC
GCCCACAACG ATGAGCAAGC AACACGCATC GGTAACGAGC TGGTGCAGTT AGTGAATCAA
TGGTGGCAAA ACCATATACA GCAAAACTTT AATCTGCCCT GTGCATTAGA GCTGGAGTTC
GAAATCCACT ACCGGCGTTT TTTGATGCCC ACTATTCGGG GCGCGGAGCA AGGCAGTAAA
AAACGCTATG CGGGACTCAT CTCCACCCCG ACGGGTGATC AAATGGTTTA TAAAGGGCTG
GAAACCGTCC GTACCGATTG GACCCCACTG GCACAGCAAT TCCAGCGCGA GCTGTATCTG
CGTATCTTCC AACAACAACC GTATCAAGAT TATGTGCGGG ATTACGTAGC CCGTACCCTG
AATGGCGAGT TGGATGAGCA ACTGGTTTAC CGCAAACGCC TGCGTCGGCG GTTGGATGAC
TATCAGCGTA ACGTCCCCCC GCACGCCAGA GCGGCACGTC TGGCCGATGA GTTTAACCGT
AAGCTTGGCC GACCACTGCA ATATCAAAAT GGCGGATGGA TCAGCTATGT GATGACCACC
GCAGGCCCCG AACCTTTAGA AACGCGGCAA TCGCCCATCG ATTATGATCA CTATCTGACA
CGCCAGCTAC AACCCGTAGC AGACGCTATA CTTCCCTTCA CTCAGGATGA TTTCACCACA
CTGATCACCG GTCAGATGGG ACTTTTTTAA
 
Protein sequence
MGQTRQGFLL TRHWRDTPAG TEVEFWLATD EGPQHVRLPP QPSVAFIPAE QQQRAETVLR 
AERHWQLRPL ALTDFHRRPV LGLYCTQHRQ LIRLEKRLRE SGVNVYEGDI RPPERFLMER
FITAPVWFSG QENDHGPLLN TQLKPADDYR PTLKLVSLDI ETSEHGELYC IGLEGCGQRQ
VYMLGPPNGE TTGTPLDFNL EYVASRPLLL EKLNQWLAVH DPDAIIGWNL VQFDLRVLQK
HADRYQIPLR FGRGGNLLEW REHGFKQGHF FASAAGRLII DGIEALKSAT WNFPSFSLES
VSQTLLGEGK ASDSPYQRMD EINQRFAHDK PALARYNLKD CELVTRIFAK TELLSFLLER
STVTGLAADR SGGSVAAFTH LYLPRMHRIG YVAPNLGELP EEHSPGGFVM DSQPGLYDSV
LVLDYKSLYP SIIRTFLIDP VGLVAGMQQP DIQHSVPGFR GAWFSREKHC LPAIVNQIWQ
GREAAKRQQN KPLSQALKII MNAFYGVLGS SGCRFFDPRL ASSITLRGHE IMRQTRELIE
AQGYQVIYGD TDSTFVWLKS AHNDEQATRI GNELVQLVNQ WWQNHIQQNF NLPCALELEF
EIHYRRFLMP TIRGAEQGSK KRYAGLISTP TGDQMVYKGL ETVRTDWTPL AQQFQRELYL
RIFQQQPYQD YVRDYVARTL NGELDEQLVY RKRLRRRLDD YQRNVPPHAR AARLADEFNR
KLGRPLQYQN GGWISYVMTT AGPEPLETRQ SPIDYDHYLT RQLQPVADAI LPFTQDDFTT
LITGQMGLF