Gene YpsIP31758_3408 details

Gene Information

• Locus tag: YpsIP31758_3408
• Symbol: leuD
• ID: 5387846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3833894
• End bp: 3834496
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640866423
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001402365
• Protein GI: 153950749
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAT TTATTCAACA CATTGGTTTG GTTGCGCCGT TAGATGCAGC AAACGTCGAT 
ACCGACGCGA TTATCCCTAA GCAGTTTTTG CAAAAAGTGA CTCGCACGGG CTTTGGCCAA 
CACCTGTTTA ACGATTGGCG TTTTTTGGAT GATGCCGGCA AGGTACCGAA TCCTGATTTT 
GTCCTGAACC TGCCTCGCTA TCAGGGTGCC ACTATTTTGT TAGCCCGTGA GAATTTTGGC 
TGTGGCTCCT CACGTGAACA CGCACCATGG GCGCTGACGG ATTTTGGTTT TAAAGTGGTT 
ATCGCCCCGA GTTTTGCTGA TATTTTTTAT GGTAACGCGT TTAATAACCA ATTATTACCG 
GTGACATTAA GCGAAGCGGA TGTTGATACC TTATTCCAAT TGGTTAAAGA GAATGAAGGT 
ATTGAGTTTG TGGTTGATCT CGAGCAGCAA ACGGTTAATG CCGGTGGCAA AAGCTATGCT 
TTCGAAATCG ATCCTTTCCG CCGCCACTGT ATGATTAATG GGTTGGATAG CATTGGCTTG 
ACGTTGCAGC ATGAACACAA TATCTCAGCA TACGAAAAAC AACAGCCTGA ATTTCTACGT 
TAA 

 

Protein sequence

MAKFIQHIGL VAPLDAANVD TDAIIPKQFL QKVTRTGFGQ HLFNDWRFLD DAGKVPNPDF 
VLNLPRYQGA TILLARENFG CGSSREHAPW ALTDFGFKVV IAPSFADIFY GNAFNNQLLP 
VTLSEADVDT LFQLVKENEG IEFVVDLEQQ TVNAGGKSYA FEIDPFRRHC MINGLDSIGL 
TLQHEHNISA YEKQQPEFLR