Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3389 |
Symbol | murD |
ID | 5386691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3809925 |
End bp | 3811241 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640866404 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001402346 |
Protein GI | 153947798 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGATT ATCAGGGTAA AAAAGTGGTC ATCATCGGGC TGGGGCTAAC CGGCCTTTCC TGCGTTGATT TCTTTATAGC GCGTGGTGTC ACGCCGCGCG TGATGGATAC CCGCATCAAT CCACCGGGCT TAGATCAATT ACCCGAAAGT GTCGAACAGC ATGTGGGTGA TTTGAACCAA GAATGGCTAC TGGACGCTGA TTTAATTGTT GTTAGCCCCG GTATGGCTCT GGCACATCCT GCATTAAGTG AAGCCGCCGA GGCCGGTGTC GAGATCATTG GCGATATCGA ACTGTTCTGC CGTGAAAATC AGGCACCGGT TGTGGCTATC ACTGGCTCCA ACGGCAAAAG TACCGTGACG ACGCTGGTCG GTGAAATGGC AAAAGCGGCA GGTTGGTCAG TGGGGGTCGG CGGCAATATC GGCGTTCCGG CACTGACATT GCTGAAGCAA GATAACCAAT TAACTGTCTT GGAATTATCA AGTTTCCAAC TGGAAACCAC CCACAGCTTG CGGGCCTCTG CTGCGACGAT TCTGAACGTG ACGGAAGATC ATACTGACCG TTATCCACTC GGTTTGCAGC AATACCGTGC GGCGAAACTG CGGGTGTATG AAAATGCCAA GGTTTGTGTC GTGAATGCCG ATGATGCACT CACCATGCCG GTCCGTGGTG CTGATAGCCG TTGCATCAGT TTTGGGGTCG ATGTCGGTGA CTACCACCTG AATAAGCAGC AGGGTGAAAT TTGGTTACGG GTTCGTGGTG AGAAAGTGCT GAACACCCGT GAAATGAAAT TAAGTGGGCG TCATAACTAT ACCAATGCGC TGGCCGCCCT GGCATTAGCT GATGCCGTGG GTATCCCACG GGCATCCAGT CTGAAAGCCT TGACGACCTT TTCCGGCTTG CCACACCGCT TCCAATTGGT GCTTGAGCGC CATGGTGTGC GCTGGATCAA CGACTCCAAA GCGACCAACG TGGGCAGCAC TGAAGCCGCG CTGGATGGTT TACAGGTTGA TGGCACCTTG CATTTATTGT TGGGGGGCGA CGGTAAATCT GCTGATTTCT CCGGGTTAAC GCGCTTCCTG CAAGGGGATC GCATCAAGGT CTACTGTTTT GGCCGCGATG GCGGTCAATT GGCTGCGTTG CGCCCTGACG TCTCTCAACT TACCGAGACG ATGGCGCAGG CTATGGCGTT GGTGGCAAAA GTTGTGCTAC CCGGCGATAG GGTGCTGCTG TCACCTGCGT GTGCCAGCCT GGATCAATTC CGCAGCTTTG AGCATCGTGG TAATGAGTTT GCTCGTCTGG CAGAGGAGTT AGGCTGA
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Protein sequence | MVDYQGKKVV IIGLGLTGLS CVDFFIARGV TPRVMDTRIN PPGLDQLPES VEQHVGDLNQ EWLLDADLIV VSPGMALAHP ALSEAAEAGV EIIGDIELFC RENQAPVVAI TGSNGKSTVT TLVGEMAKAA GWSVGVGGNI GVPALTLLKQ DNQLTVLELS SFQLETTHSL RASAATILNV TEDHTDRYPL GLQQYRAAKL RVYENAKVCV VNADDALTMP VRGADSRCIS FGVDVGDYHL NKQQGEIWLR VRGEKVLNTR EMKLSGRHNY TNALAALALA DAVGIPRASS LKALTTFSGL PHRFQLVLER HGVRWINDSK ATNVGSTEAA LDGLQVDGTL HLLLGGDGKS ADFSGLTRFL QGDRIKVYCF GRDGGQLAAL RPDVSQLTET MAQAMALVAK VVLPGDRVLL SPACASLDQF RSFEHRGNEF ARLAEELG
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