| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3372 |
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| Symbol | |
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| ID | 5385428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3791101 |
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| End bp | 3792300 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640866387 |
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| Product | type IV pilin biogenesis protein |
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| Protein accession | YP_001402329 |
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| Protein GI | 153948491 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCCGCC ATCGTTTATT CAATTGGACA GCTCTCAACA AAACAGGGGA GCTACAGACG
GGCATGCTAC TGGCAACTGA GAGAAACAGT GTCTATGAAC ATATCATCCA ACATGGCTTA
CAGCCCCTAG GCGTGAAAGG GGGAAGGCGG TTATCTGCAC GCTACTGGCA AGGGGAACGG
TTGGTGGCAA TGACCCGCCA ATTAGCGACT TTATTGCAAG CGGGTTTACC GTTGGTCAAC
AGTTTACAAT TATTGGCAAA AGAGGCAGAT GACTCAGCAT GGCGTTGCCT ATTAGATGAG
ATAAGTCAGC AAGTTGCACA AGGCCAGTCA CTCTCGGAAG TGATGGAACA GTATCCACAC
GTATTCCCCC GACTGTATCC TCCAGTGGTT GCCGTCGGGG AGCTTACGGG TAATCTTGAG
CAATGTTGTA CTCAATTAGT ACACCATCAG GAACGGCAGC AAAATTTACA CAAAAAAGTC
ATAAAAGCGC TGAAATACCC CGTTGTGGTC TGCATCGTCG CATTGGTAGT CAGTGTCATT
ATGTTAGTCA TGGTGTTACC CGAATTTGCA CAAATATATC AATCGTTTGA TACCCCCCTG
CCGGGGCTAA CTGCAAGCTT ACTGTGGCTA TCAACTTTTC TCACTTTTTA TGGCCCCTAT
CTGGCGCTGA TAATAGCAAT AGTGTGTATT GGGTATTTCT ATACATTACG AAAAAAATCT
CGCTGGCAGC AATGGGAACA GACCATTCTA TTAAGCATTC CCTTGGTCTC AACATTAATC
CGTGGTAGCT GCCTCAGCCA AATTTTTCAA ACGTTAGCTA TCACACAACA AGCCGGGCTA
CCCCTGTCAG CCGGGTTAGA TGCAGCGGCT CGATCCATTC ACAATTACAA TTATCAGCAA
GCCTTAAGGT GTATTCAAAA ACAAATTAGC CAAGGTATAC CGCTGTATAC CACTCTTAAT
CAGCACCCTT TATTTCCTGC CATTTGTCAG CAGCTCATTA GGGTTGGTGA AGAATCAGGC
TCACTGGATG TGTTGCTGGA AAAGTTAGCC TGTTGGCATC AGCAACAAAC TCAGAATTTG
GCAGATAACG TCACTCAAAT GCTAGAGCCA CTTCTTATGC TGATTATTGG CAGTATTGTC
GGCGTACTGG TGATCGCCAT GTATTTACCC ATATTCCAGT TAGGTGATGT TATCGGGTAA
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| Protein sequence | MSRHRLFNWT ALNKTGELQT GMLLATERNS VYEHIIQHGL QPLGVKGGRR LSARYWQGER
LVAMTRQLAT LLQAGLPLVN SLQLLAKEAD DSAWRCLLDE ISQQVAQGQS LSEVMEQYPH
VFPRLYPPVV AVGELTGNLE QCCTQLVHHQ ERQQNLHKKV IKALKYPVVV CIVALVVSVI
MLVMVLPEFA QIYQSFDTPL PGLTASLLWL STFLTFYGPY LALIIAIVCI GYFYTLRKKS
RWQQWEQTIL LSIPLVSTLI RGSCLSQIFQ TLAITQQAGL PLSAGLDAAA RSIHNYNYQQ
ALRCIQKQIS QGIPLYTTLN QHPLFPAICQ QLIRVGEESG SLDVLLEKLA CWHQQQTQNL
ADNVTQMLEP LLMLIIGSIV GVLVIAMYLP IFQLGDVIG
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