| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3346 |
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| Symbol | |
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| ID | 5387495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3762106 |
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| End bp | 3763359 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640866361 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_001402303 |
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| Protein GI | 153948007 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.000257148 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACCGA CAACCCAGGC TGACCTCTTG CCAAATGTGG AGGTCACACC ACCAAAATAT
ATGATGACCG AACGCGATAG CGAAGTTTAT TCGTTGGTTG GTGAACATGT TATTCCCGTC
GGAGAAATCA AAGAAGGCCA GTTGATTCAG GTGACGCCAG TTATTGCTGA ATACTATGAG
TTTAAGTTTG GCAACGGTAC CGGTTTTATT GATAAAGATG ATTTACGTGA GATTAATAAA
GCACAAAAAA ACAACGACAT GTTGGGCGAT TTAAATAAGC CCCTACCGAA TCAAAATATA
CTGACGATGC GTGAGGCTAA GGTTTATTTG GCTGCGGATG TGCGCAGTGA ACAATTTGCT
GTTCTGGCCG AGAACTTACG TTATCCCATT GTTGGAAAAC TGAAAGATCG TTTAAGCAAT
ACTTGGTATC AGGTCAATAT TGGTGATCGC TTGGGGTATG TCAGCAGCGC AGACGCTGAA
ATAGACAACG GTATTCCGAT CCTGACTTAC CATCACATGT TGAAGAACGA AGAAAATAAA
CGCTTCCTGA ACACATCAAC CACCACATCT GATGTGGCGT TCAGTAATCA AATGGCTTAC
CTCAAACAGG CGGGCTATGA CACCATTTCT CTGTATCAGC TCGAAGGCTA TCTTAATAAC
AAGATTAATC TGCCTGCGAA AGTTGTGGTG CTGACATTTG ATGATGGTTT GAAGTCAGTG
AGTCGCTATG CTTATCCTAT TCTGAAAGAG AATGGTTTCC GCGCCACGGC GTTTATTATC
TCTTCGCGTA TTAAACGGCA TCCACAAAAA TGGAATCCAG ATTCATTACA GTTTATGAGT
ATTGCTGAAC TGAAAGGAAT TCAAGATGTG TTTGATATAC AGTCTCATAC GCATTTTTTA
CACCGCACCG ATAATAGACA CCATCCTATA TTATTGAGTC GCTCTTATCA CAATATCATT
TTTGATTTTG AACGCTCACG TCGGGCATTA GCGCAGTTCA ATCCGCATGT GATTTTTCTG
TCATATCCCT TCGGGGGTTT TAATCAAACA GCGGTCAATG CGGCGAAGAA TGCCGGTTTT
CATTTGGCGG TGACCACGAT GCAAGGCAAG GTCAAGCCAG GCGATAATCC ATATACCCTG
AAACGGCTCT ATATTCTCCG TACTGACTCA ATACCGACCA TGGCGGAGCG CATAGCCAAT
CAACCCGGCT CGGTTGCGGT AAAACCGGCA CCCGCAGTGA TTGAAATGGA TTAA
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| Protein sequence | MIPTTQADLL PNVEVTPPKY MMTERDSEVY SLVGEHVIPV GEIKEGQLIQ VTPVIAEYYE
FKFGNGTGFI DKDDLREINK AQKNNDMLGD LNKPLPNQNI LTMREAKVYL AADVRSEQFA
VLAENLRYPI VGKLKDRLSN TWYQVNIGDR LGYVSSADAE IDNGIPILTY HHMLKNEENK
RFLNTSTTTS DVAFSNQMAY LKQAGYDTIS LYQLEGYLNN KINLPAKVVV LTFDDGLKSV
SRYAYPILKE NGFRATAFII SSRIKRHPQK WNPDSLQFMS IAELKGIQDV FDIQSHTHFL
HRTDNRHHPI LLSRSYHNII FDFERSRRAL AQFNPHVIFL SYPFGGFNQT AVNAAKNAGF
HLAVTTMQGK VKPGDNPYTL KRLYILRTDS IPTMAERIAN QPGSVAVKPA PAVIEMD
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