| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3345 |
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| Symbol | panD |
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| ID | 5386950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3761593 |
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| End bp | 3761973 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866360 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_001402302 |
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| Protein GI | 153948018 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00000505092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATACGCA CTATGTTGCA AGGCAAACTG CACCGGGTCA AAGTCACTCA AGCGGATTTG
CACTATGAAG GCTCCTGCGC CATCGATCAG GATTTTCTGG AAGCCGCCGG TATTCTGGAA
TACGAAGCTA TTGATATTTA TAACGTTGAT AACGGTCAGC GTTTTTCAAC CTATGCGATT
GCTGCTGAGC GTGGTTCGCG GATTATCTCC GTGAATGGTG CCGCAGCACG CTGCGCTTGT
GTCGGTGATA AGCTCATTAT CTGTTCTTAT GTACAGATGT CAGATGCTGC TGCCCGTTTG
CACCACCCTA AAGTGGCTTA TTTTGAAGGT GAAAATCAGC TACAACGCAA AGCTAAGGCC
GTGCCGGTTC AGGTCGCTTA A
|
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| Protein sequence | MIRTMLQGKL HRVKVTQADL HYEGSCAIDQ DFLEAAGILE YEAIDIYNVD NGQRFSTYAI
AAERGSRIIS VNGAAARCAC VGDKLIICSY VQMSDAAARL HHPKVAYFEG ENQLQRKAKA
VPVQVA
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