| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3294 |
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| Symbol | nlpD |
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| ID | 5387786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3705679 |
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| End bp | 3706662 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866309 |
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| Product | lipoprotein NlpD |
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| Protein accession | YP_001402251 |
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| Protein GI | 153947948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAGAT TACGCCGAGT CGCGGCATGT ACGGTTGTGA GTTTGTGGTT AGTAGGTTGT
ACCAATGATA ATTCAACATC TGCACCCATC AGCAGTGTGG GGGGCGATCG TTCAGGGACG
ATGTTGAGTG GAGCGAACAC CGATAGCTCT GGGGGGCGCA TCGTTTATAA CCGTAGTTAC
GACAATATCC CCAAAGGAAG CTACAGCGGT AATACCTATA CCGTTAAGCG TGGTGACACG
CTGTTTTATA TCGCTTGGAT AACAGGAAAT GACTTCCGTG ATTTGGCGGC AAAAAATAAT
ATTGCAGAAC CCTATAGCCT GAATGTGGGG CAATCTATTC AATTGGGTAA TGGGTCTGGT
GGCGGTATGT TAGCCGCCAC TGATGCCACA TCAGGCGGAA TAGCACAACC GCCGTCAAAT
ATTCAGAACA CAACTCCTAT TCAGAACACA ACTACAACGG TTGATTCTCA ATCAACTAGC
GCGTATTCTG GAAACTCGGG TAAACAGAAT GTTGGCAAAA TGTTGCCATC ATCTGGTGCG
GTTGTCGCTA CAACAGCACC TGTTACCGCA CCAAGCAGTT CTATCAGTGA ACCAGCCAGC
AATGGTGGTC CAGTTAGTGG CTGGAGATGG CCAACCGATG GTAAAACGAT CGATAGCTTC
TCTGCTTCCG AAGGGGGCAA TAAAGGGATT GATATCGCCG GTTCTCGTGG GCAACCTATC
CTCGCCACAG CAAGTGGCCG GGTTGTGTAT GCTGGGAACG CACTGCGTGG TTACGGTAAT
CTAATCATCA TCAAACACAA TGATGATTAC CTGAGCGCCT ACGCTCATAA CGATACAATG
CTGGTCCGGG AACAACAAGA AGTGAAGGCG GGTCAAAAAA TAGCAACCAT GGGTAGCACC
GGAACCAGTT CAGTTAGATT GCATTTTGAA ATTCGTTACA AGGGGAAATC CGTAAACCCG
CTGCGTTACC TTCCGCAGCG ATAG
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| Protein sequence | MIRLRRVAAC TVVSLWLVGC TNDNSTSAPI SSVGGDRSGT MLSGANTDSS GGRIVYNRSY
DNIPKGSYSG NTYTVKRGDT LFYIAWITGN DFRDLAAKNN IAEPYSLNVG QSIQLGNGSG
GGMLAATDAT SGGIAQPPSN IQNTTPIQNT TTTVDSQSTS AYSGNSGKQN VGKMLPSSGA
VVATTAPVTA PSSSISEPAS NGGPVSGWRW PTDGKTIDSF SASEGGNKGI DIAGSRGQPI
LATASGRVVY AGNALRGYGN LIIIKHNDDY LSAYAHNDTM LVREQQEVKA GQKIATMGST
GTSSVRLHFE IRYKGKSVNP LRYLPQR
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