| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3253 |
|---|
| Symbol | rbsB5 |
|---|
| ID | 5388238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3661081 |
|---|
| End bp | 3662022 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640866268 |
|---|
| Product | ribose ABC transporter, periplasmic ribose-binding protein |
|---|
| Protein accession | YP_001402210 |
|---|
| Protein GI | 153948975 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CCCTACTGAA ATCCTGTCTT ACCGCAGCAT TAATCTCAAT GGCAGGCGTT
GCTGGTGCGG CCAGCAATGG TCTGATCGCC ATCATCACCC CCTCCCACGA TAATCCGTTC
TTTAAAGCAG AGGCTGAAGG TGCCAAAGCG AAAGCGACGG AACTGGGATA CACCACACTG
GTTGCTTCGC ATGATGACGA TGTGAACAAA CAGAACCAAC TCATTGAGAC CGCTATCGCC
CGTAAAGCCA AAGCGATCAT TCTGGATAAC GCCGGCTCTG ACGCGACCAT CGGCCCATTG
AAAAAAGCCA AAGCCGCGGG TATCCCGGCC TTCCTTATTG ACCGTGAAAT CAATGAAACC
GGGATTGCCG TCTCTCAGAT TGTCTCTAAC AACTATCAGG GCGCGCAGCT GGGCGCGGAG
AAGTTTGTCA CTCTGATGGG GGGCAAAGGT AAATATATTG AATTACTGGG GCGCGAGTCT
GACACCAACG CTCATGTACG TTCGCAGGGT TATCACGACG TCATTGACGA ACATAGCGAC
ATGAAGATGG TTGCTCAACA GACAGCAAAC TGGAGCCAGA CTGAAGCATT CAACCGTATG
GAATCCATTT TGCAGGCTAA CCCTGATATT ACAGGGGTCA TTTCCGGTAA CGACACGATG
GCATTAGGGG CCGAAGCCGC ATTAAAAGCG GCGGGCCGCA ATGATGTGGT GGTGGTGGGA
TTTGATGGCA GTGACTATGT CCGCGACTCG ATCATTAACA ACGGCAATAT CAAAGCCACC
GTATTGCAGC CGGGTTGGGC GCAAGCACAA ATGGCCGTTG TCCAGGCCGA TCAGTATCTG
AAAACCGGTA AAACCGGTCT GGAAGAGAAA CAACTGATGG ACTGTGTATT GATTGACGAA
AATAACGCTA AGAACCTGAA TGTCTTTGCG CTGAAAGACT AG
|
|---|
| Protein sequence | MKNTLLKSCL TAALISMAGV AGAASNGLIA IITPSHDNPF FKAEAEGAKA KATELGYTTL
VASHDDDVNK QNQLIETAIA RKAKAIILDN AGSDATIGPL KKAKAAGIPA FLIDREINET
GIAVSQIVSN NYQGAQLGAE KFVTLMGGKG KYIELLGRES DTNAHVRSQG YHDVIDEHSD
MKMVAQQTAN WSQTEAFNRM ESILQANPDI TGVISGNDTM ALGAEAALKA AGRNDVVVVG
FDGSDYVRDS IINNGNIKAT VLQPGWAQAQ MAVVQADQYL KTGKTGLEEK QLMDCVLIDE
NNAKNLNVFA LKD
|
|---|
| |