Gene YpsIP31758_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3230 
Symbolffh 
ID5384892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3635262 
End bp3636623 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content48% 
IMG OID640866239 
Productsignal recognition particle protein 
Protein accessionYP_001402187 
Protein GI153949054 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0218227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGA ACTTAACTGA TCGATTGTCG CGCACACTGC GCAATATCAG CGGCCGTGGC 
CGGCTGACAG AAGAAAATAT TAAAGAAACG CTACGTGAAG TGCGCATGGC ATTACTTGAA
GCTGACGTCG CTCTGCCCGT TGTTCGTGAC TTTATAAACC GAGTAAAAGA GCGGGCTGTT
GGGCATGAAG TTAATAAAAG TCTGACGCCA GGCCAAGAAT TCGTCAAAAT AGTTAAAAAT
GAATTGATCA GCGCCATGGG CGAGGTCAAT AACGAACTGA ATCTGGCTGC ACAACCGCCA
GCAGTTGTGT TAATGGCTGG CTTGCAAGGT GCGGGTAAGA CCACCAGTGT AGCGAAACTG
GGGAAATTTC TTAAAGAAAA ACAGAAGAAA AAAGTGCTGG TCGTGTCTGC TGACGTTTAT
CGCCCTGCGG CGATCAAACA GTTGGAAACC CTGGCTCAGG GTGTTGGCAT TGATTTCTTC
CCGTCTGATG CACAGGAAAA ACCGATTGAT ATTGTGAATC GTGCCCTGCA ACAGGCAAAG
CTTAAATTTT ATGATGTTCT GATTGTCGAT ACCGCAGGTC GCTTACACGT TGATGAAGCG
ATGATGGACG AAATCAAACA GGTTCATGCG GCGATTAAGC CTGTTGAAAC CTTGTTTGTC
GTCGATGCGA TGACCGGTCA GGATGCGGCG AATACCGCCA AAGCATTCAA CGAAGCACTG
CCACTCACCG GTGTCGTGCT GACTAAAGTG GATGGCGATG CGCGCGGTGG TGCGGCTTTA
TCTATCCGCC ATATCACCGG TAAACCTATT AAATTCCTTG GCGTCGGTGA GAAATCTGAT
GCACTGGAAC CGTTCCATCC AGACCGAATA GCCTCACGTA TCTTGGGTAT GGGCGATGTG
CTGTCGCTGA TTGAAGATAT CGAAAGCAAA GTTGACCGTG CGCAAGCGGA GAAACTGGCA
ACAAAACTGA AAAAAGGCGA TGGTTTCGAT CTCAATGACT TCCTCGACCA GTTGAAGCAG
ATGCGCAACA TGGGGGGGAT GGCCAGTATG TTGAGTAAAA TGCCAGGGGC AGGTCAGTTG
CCAGAAAACG TAAAATCGCA AATGGATGAT AAAGTCACGG TGCGGATGGA GGCGATCATC
AATTCTATGA CGCTGAAAGA GCGCGCTAAA CCTGAAATTA TCAAAGGTTC ACGTAAGCGC
CGTATCGCAA CCGGTTCTGG TGTGCAGGTA CAGGATGTTA ACCGTTTGCT GAAACAGTTT
GATGAAATGC AGCGCATGAT GAAGAAAATG AAAAACGGCG GTTTGGCCAA AATGATGCGT
GGCATGAAAG GTATGATGCC ACCCGGGTTC CCAGGTCGCT AA
 
Protein sequence
MFENLTDRLS RTLRNISGRG RLTEENIKET LREVRMALLE ADVALPVVRD FINRVKERAV 
GHEVNKSLTP GQEFVKIVKN ELISAMGEVN NELNLAAQPP AVVLMAGLQG AGKTTSVAKL
GKFLKEKQKK KVLVVSADVY RPAAIKQLET LAQGVGIDFF PSDAQEKPID IVNRALQQAK
LKFYDVLIVD TAGRLHVDEA MMDEIKQVHA AIKPVETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVVLTKV DGDARGGAAL SIRHITGKPI KFLGVGEKSD ALEPFHPDRI ASRILGMGDV
LSLIEDIESK VDRAQAEKLA TKLKKGDGFD LNDFLDQLKQ MRNMGGMASM LSKMPGAGQL
PENVKSQMDD KVTVRMEAII NSMTLKERAK PEIIKGSRKR RIATGSGVQV QDVNRLLKQF
DEMQRMMKKM KNGGLAKMMR GMKGMMPPGF PGR