Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3148 |
Symbol | |
ID | 5387658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3542336 |
End bp | 3543085 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640866155 |
Product | pilZ family protein |
Protein accession | YP_001402108 |
Protein GI | 153947542 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.337895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGAAA CGTCTAAAGA GCAATTTGTT AAAAAAAATA AACTAGCGAT CTGTGCAATT CTTCGGGATT TACAGAAGAA CGATACTGCC GTGATGGTTA CCCATGCTCG AGGACAATTT ATTAGCCGTA TTCTGGATAT ACAGCCTGAG ACTAATCAGT TTATTTTCGA TTTCGGCAGT GTAGAAAACG AAAATGTTTT GGCTCTTGGT GCGGAGCAAC TCACGATTAT TGTTGAACCT ACGGGTGCCA AAATTGAATT CACCTGTAAC AAGCTGAAAC ATGTCGAATA TTTGTCACTA CCCGCCTTCA GTTCTGCCAT CCCGGAACAG CTCTATTTCA TTCAGAGACG GGAATATTTT CGTGTCAGTA TTCCGCAATG GCCAGCTTAT TATTGTAGTG GGAAATTCCC TGACGGCACT CAGTATAAAT ATACATTGGC CGACATCTCC TTGGGTGGAA TGGGTTTATA TGCCATGAAA GGTAGCGAAT TTCCGCTCCA GGGATGCAGT GTTCTGCGAG ATGCAGCGGT AGATTTATGT GGTTTTGGCC TCTTTAAATT AGATCTGCAA TTTATCCGGG CGCTCGATAA ACAAGTGGTT AATAACAAGG GCGAAACGCT GACAGTGCAA CGTTTGAGTT TTAAATTCTT GCGCTTAAGT CCTATTCAAG AGAAAGGCTT ACAGCGAGCC ATTTTTGAAC TGGAAAAACA GCAAACAGCT AAGGCGAGGA AATTTCAGGA AGGCCTGTAG
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Protein sequence | MSETSKEQFV KKNKLAICAI LRDLQKNDTA VMVTHARGQF ISRILDIQPE TNQFIFDFGS VENENVLALG AEQLTIIVEP TGAKIEFTCN KLKHVEYLSL PAFSSAIPEQ LYFIQRREYF RVSIPQWPAY YCSGKFPDGT QYKYTLADIS LGGMGLYAMK GSEFPLQGCS VLRDAAVDLC GFGLFKLDLQ FIRALDKQVV NNKGETLTVQ RLSFKFLRLS PIQEKGLQRA IFELEKQQTA KARKFQEGL
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