Gene YpsIP31758_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3122 
SymbolyajC 
ID5384479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3513049 
End bp3513384 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content44% 
IMG OID640866129 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001402082 
Protein GI153948200 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00795341 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTT TCATTTCTGA TGCTGTCGCA TCTGCAGGGG CTCCGGCTCA AGGAAACAGC 
ATGACCTCCA TGCTGATCAT GCTGGTAGTA TTCGGTCTGA TTTTCTACTT TATGATCCTG
CGTCCACAAC AAAAACGTGC CAAAGAACAT AAAAAACTGA TGGATTCTAT TGGCAAAGGT
GATGAAGTAT TAACATCGGG TGGTTTTATT GGTCGTGTTA CTAAAGTTGC GGAAACAGGC
TATGTTGTTA TCGCGCTGAA TGACACTACC GAAGTGATGA TCAAGCGTGA CTTCGTGGCT
GCCGTGTTAC CGAAAGGTAC AATGAAGGCT CTGTAA
 
Protein sequence
MSFFISDAVA SAGAPAQGNS MTSMLIMLVV FGLIFYFMIL RPQQKRAKEH KKLMDSIGKG 
DEVLTSGGFI GRVTKVAETG YVVIALNDTT EVMIKRDFVA AVLPKGTMKA L