Gene YpsIP31758_3118 details

Gene Information

• Locus tag: YpsIP31758_3118
• Symbol: nrdR
• ID: 5387665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 3508100
• End bp: 3508549
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640866125
• Product: transcriptional regulator NrdR
• Protein accession: YP_001402078
• Protein GI: 153949448
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.125691
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTGTC CGTTTTGTGC CGCTGTGGAT ACTAAAGTGA TTGACTCCCG TCTGGTGAGT 
GATGGCTCAC AAGTCCGCCG CCGCCGCCAG TGTTTAGATT GTAATGAGCG TTTTACCACT 
TTTGAAGTGG CTGAGCTGGT GTTACCACGG GTCATAAAAA GTGACGAGGT ACGCGAACCG 
TTCAATGAAG AGAAATTACG ACGCGGTATG TTGAAAGCGT TAGAAAAGCG GCCAGTTAGC 
TCAGATGATG TTGAAACAGC GATAAGCCAC ATAAAATCTC AATTACGCGC CACCGGTGAG 
CGGGAAGTGC CGACCAAAAT GGTGGGTAAT TTAGTGATGG AAGCGCTGAA ACGTTTGGAT 
AAAGTCGCTT ATATCCGCTT TGCCTCGGTT TATCGCAGTT TCGAAGATGT CCGCGAATTT 
GGCGAAGAAA TTGCGCGCTT GCAGGATTAA 

 

Protein sequence

MHCPFCAAVD TKVIDSRLVS DGSQVRRRRQ CLDCNERFTT FEVAELVLPR VIKSDEVREP 
FNEEKLRRGM LKALEKRPVS SDDVETAISH IKSQLRATGE REVPTKMVGN LVMEALKRLD 
KVAYIRFASV YRSFEDVREF GEEIARLQD