Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3092 |
Symbol | clpP |
ID | 5384406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3482863 |
End bp | 3483486 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640866099 |
Product | ATP-dependent Clp protease proteolytic subunit |
Protein accession | YP_001402052 |
Protein GI | 153950622 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000000388332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATACA GTGGCGAACG AGATCAATTT GCACCTAACA TGGCTCTGGT GCCAATGGTA GTTGAACAGA CTTCACGTGG GGAGCGTTCT TACGATATCT TCTCCCGTCT GTTGAAAGAA CGCATTATCT TCCTGACAGG TCAGGTTGAA GACCATATGG CTAACCTAAT CACAGCACAG ATGCTGTTTT TGGAAGCCGA GAATCCAGAA AAAGATATTT TTCTGTATAT CAACTCCCCA GGTGGGGTGA TTACTGCCGG GATGTCAATT TATGACACCA TGCAATTCAT TAAGCCTGAT GTCAGCACTA TCTGTATGGG GCAAGCATGT TCAATGGGGG CATTCCTCTT GACTGCGGGT GCCAAAGGTA AACGTTTCTG CTTGCCGAAT TCGCGGGTGA TGATTCACCA ACCGTTGGGC GGTTTCCAGG GACAGGCCAC AGACATTGAA ATCCATGCTA AAGAGATTTT AAAAGTGAAA TCGCGCATGA ATGAACTGAT GGCATATCAC ACGGGGAAAT CTCTCGAAGA AATAGAGAGA GACACAGAGC GTGACCGTTT CTTGTCAGCA GAACAGTCTG TAGAATATGG GTTAGTTGAT TCCGTATTCA CCCGCCGTGA CTAA
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Protein sequence | MSYSGERDQF APNMALVPMV VEQTSRGERS YDIFSRLLKE RIIFLTGQVE DHMANLITAQ MLFLEAENPE KDIFLYINSP GGVITAGMSI YDTMQFIKPD VSTICMGQAC SMGAFLLTAG AKGKRFCLPN SRVMIHQPLG GFQGQATDIE IHAKEILKVK SRMNELMAYH TGKSLEEIER DTERDRFLSA EQSVEYGLVD SVFTRRD
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