| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3024 |
|---|
| Symbol | |
|---|
| ID | 5387995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3403628 |
|---|
| End bp | 3404542 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640866029 |
|---|
| Product | SPFH/band 7 family protein |
|---|
| Protein accession | YP_001401984 |
|---|
| Protein GI | 153947186 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACAG TTATCCCTAT TCTTATCGTT GTCGCTCTGA TTGTCGTACT TTCTGCAATC
AAAATCGTCC CGCAAGGTTT TCAGTGGACT GTCGAACGTT TTGGTCGCTA TACCAAAACA
CTGATGCCAG GCCTGAATAT CGTTGTACCG TTTATGGATC GTGTTGGCCG TAAAATTAAT
GTGATGGAAC AAGTTCTTGA TATTCCATCT CAAGAAATCA TTTCCCGTGA TAACGCCAAC
GTGGCAATCG ATGCCGTTTG CTTTATCCAA GTTATTGACC CGGTGAAAGC GGCTTATGAA
GTCAGCAATT TGGAATTGGC TATCGTCAAC CTGACCATGA CCAACTTCCG TACCGTCTTA
GGTTCGATGG AACTGGACGA AATGCTGTCT CAGCGCGATA ACATCAACAG CCGCCTGCTG
CATATCGTCG ATGAAGCCAC CAACCCATGG GGCATCAAAA TTACCCGTAT CGAAATCCGT
GATGTGCGCC CACCAACGGA ACTGATTTCA GCGATGAATG CTCAGATGAA AGCTGAACGT
ACCAAGCGTG CGGATATTCT GGAAGCCGAA GGGGTTCGTC AAGCCGCTAT TTTGCGTGCT
GAAGGTGAAA AACAGTCACA AATTCTGAAA GCAGAAGGTG AACGTCAGTC TGCATTCTTG
CAAGCTGAAG CTCGTGAACG TGCCGCTGAA GCGGAAGCTC AGGCGACTAA AATGGTTTCT
GAAGCCATCG CTGCCGGCGA TATTCAAGCC ATTAACTACT TTGTGGCACA AAAATATACC
GATGCACTGC AACACATCGG CTCGGCCAAT AACAGTAAAG TCATTATGAT GCCGCTGGAA
GCCAGTAGCC TCATGGGTGC TATCGGTGGT ATTGCAGAAC TGATTGGTGA GAGTAAAAAC
AGCCGAGGTA AATAA
|
|---|
| Protein sequence | MFTVIPILIV VALIVVLSAI KIVPQGFQWT VERFGRYTKT LMPGLNIVVP FMDRVGRKIN
VMEQVLDIPS QEIISRDNAN VAIDAVCFIQ VIDPVKAAYE VSNLELAIVN LTMTNFRTVL
GSMELDEMLS QRDNINSRLL HIVDEATNPW GIKITRIEIR DVRPPTELIS AMNAQMKAER
TKRADILEAE GVRQAAILRA EGEKQSQILK AEGERQSAFL QAEARERAAE AEAQATKMVS
EAIAAGDIQA INYFVAQKYT DALQHIGSAN NSKVIMMPLE ASSLMGAIGG IAELIGESKN
SRGK
|
|---|
| |