Gene YpsIP31758_2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2994 
Symbol 
ID5387511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3373550 
End bp3375931 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content49% 
IMG OID640865998 
Productglycosy hydrolase family protein 
Protein accessionYP_001401954 
Protein GI153948994 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGA ATAAAACAGG TTTTTTCACA GCGTTTACTT TCCTTTCAGC TCCCGTTTGG 
GCCACCCCTC AGTTAAAAGA GGCTGAGTCT ATTCCCTCTG TCATCGCGGC AATGACACTG
GAAGAAAAAG CAGCCTTTGT TTCCGGCACG GGTATGAATA ACGCAGAAAA AGTTGCCGGT
GCTGCCGGTT CAACCCTGGC GATACCAAGA TTGGGGATAC CACAGATTGT TTTTGCCGAT
GGGCCGGTAG GGGTCAGGCT GGGGGCAGGA CCCACCGGCG GTGAGAAGCG CTTTGCCACA
GGGTTCCCAG TGTCGGTGGC AATGGCGGCG ACCTGGGACC CCGCCATTAT TAAGCGTGTC
GGCGGAGCCA TTGGTGATGA AGCCAAACGA TATGGTGTGG ATTTAATTCT CGGTCCTGCG
ATTAATATTC AGCGCCACCC ATTGAATGGG CGTAATTTCG AATATTTCAC AGAAGACCCC
TTACTCAATG CCATCATGAC GGCCAGTTAT ATTGACGGTA TGCAGACCGA GGGCGTGGGC
GCAGTGCTCA AACATTTTGC CGCCAACAAT CAGGAAACAC GCCGTCAGAT AGTCAACGAG
ATTATTTCAG ACCGTGCGCT ACATGAAATC TATTTCCCCG GTTTCGAATA TGCCATGGAA
AAGGCGCAAC CTTGGGCAGT AATGAGCTCT TATCCATCAA TTAATGGGAC ACCATCCTCG
CAAAATCCCT GGTTATTAAA GGATGTCTTG CGCCAACAAT GGAAGTTCGA TGGCTTTGTC
ATGTCAGATT GGTATGGTGT GGCCGATCCG GTCAGCGCAT TGAAAGGGGG TAACGATCTC
AATATGCCGG GTGGGCGCAC ACCAGACGAC TCACTATTCC TGACACCCAA TACCGATCCT
AAAGACGTGG TGTTAGCGGC GCTAAAATCT GGTGAGCTAA CCCAAGACCA GATAGACGAA
AATATTCGCA ATCTCCTCAA TGTCGTGATC AAAACTCACC GGTTCAAAAA CGGGGACGCG
GCCGTGATGC CAGAACCTGT CGATCATTCA GCATTGGCGC GACAAATTGC AGCAGATTCA
ATGGTATTAC TAAAAAATGA TGCACAAACC CTCCCAATGA AAGCCACCTT CCGCGTTGCC
GCTTTCGGTC AAAATATTGA CAATTTCTTT GTAACCGGAG GGGGGAGCGC GGAGGTCAAT
ATTGATCCCA AACGCTTGGT AACACTGCCA CAGGGCCTGA AAAACGCAGG GATAGCGCTC
ATCAGGCAGA TTGGGGATCA AACGTTGGAT GAACCGGTTA ACCAGCCTGT TATCACTAAA
GCAGCACAAC AGAGTGATAT CGCCCTGATT TCGATCGGCC GCAGTTCAAC AGAGGGGGCT
GATCGCTACT CTATGGCGAT GCATACCGCT GAAGTGGCAA TGATTCAAAA GGTGGCCTCA
GCGTTCCATC AGCAGAATAA AAAGGTGGTG GTTCTGCTCA ATATTGGTTC GCCGATAGAA
ATGGCCTCTT GGGAACAATA TGCTGATGCC ATTCTTCTCA CCTGGCAACC CGGTGAACAG
GCAGGAAATG CGGTTGCCGA TATTCTGCTT GGTAAGGTAA ATCCTTCGGG TAAATTGCCG
CTAACCTTCC CGAAACGGCT CGAAGATTCA CCAAGCTTTG GTAACTACCC TGGTAACGCT
AAAACAGTTA TCTATGGTGA AGGGATCTAT GTCGGCTATC GCTACTTTGA TACCAAGCGC
ATTGCCCCGA TGTATCCATT CGGTTATGGC CTTTCTTATT CCACAGTGAA TTATGGGAAA
ATCAGCCCAG AAAAACCGGT ATTCAACATC GATACAGAGA ATAGTATTGA GGTCAGTATC
CCGGTGCGTA ATACCTCCGG TATCGATACA AAAGAGGTTG TGCAGCTTTA TGTTCATGAC
AATGCCTCAC GCCTTGATCG GCCAGAACAG GAACTGAAAG CATTTGAAAA AGTCAGCCTG
TCGGCGGGAG AGGAAAAACG CGTGGCCTTC AAACTGGATA AACGCGCGTT CTCTTATTAC
GATGAGGATA AAAACAACTG GGTGCTTGAA CCGGGGCTCT TCACACTGCG CATTGGGCGT
TCGTCAAGAG ATATCCATGC AGAAACGCCT CTGATTGTGA AATCCTCGAC CCCAGCTTTC
TCGTTTGATA CCCCCTGGAT TGACATCCAG ACGTATGAAA AAGCGGCCAC GATCGTCGCC
CGTTTTATCG GTGATGAGCA AACTAACGCT TGGATTTATG GCAACCCAAC ACTGGGTGAT
AAACTGGAAG ATGCCCTGAA ACTGAAACCT GAATTCGCTA AAGATGAGGC GAAAAGGCAG
AAACTGAAGC AGGAAATCTT ACAAGAAATC AATTCATTGT AA
 
Protein sequence
MNLNKTGFFT AFTFLSAPVW ATPQLKEAES IPSVIAAMTL EEKAAFVSGT GMNNAEKVAG 
AAGSTLAIPR LGIPQIVFAD GPVGVRLGAG PTGGEKRFAT GFPVSVAMAA TWDPAIIKRV
GGAIGDEAKR YGVDLILGPA INIQRHPLNG RNFEYFTEDP LLNAIMTASY IDGMQTEGVG
AVLKHFAANN QETRRQIVNE IISDRALHEI YFPGFEYAME KAQPWAVMSS YPSINGTPSS
QNPWLLKDVL RQQWKFDGFV MSDWYGVADP VSALKGGNDL NMPGGRTPDD SLFLTPNTDP
KDVVLAALKS GELTQDQIDE NIRNLLNVVI KTHRFKNGDA AVMPEPVDHS ALARQIAADS
MVLLKNDAQT LPMKATFRVA AFGQNIDNFF VTGGGSAEVN IDPKRLVTLP QGLKNAGIAL
IRQIGDQTLD EPVNQPVITK AAQQSDIALI SIGRSSTEGA DRYSMAMHTA EVAMIQKVAS
AFHQQNKKVV VLLNIGSPIE MASWEQYADA ILLTWQPGEQ AGNAVADILL GKVNPSGKLP
LTFPKRLEDS PSFGNYPGNA KTVIYGEGIY VGYRYFDTKR IAPMYPFGYG LSYSTVNYGK
ISPEKPVFNI DTENSIEVSI PVRNTSGIDT KEVVQLYVHD NASRLDRPEQ ELKAFEKVSL
SAGEEKRVAF KLDKRAFSYY DEDKNNWVLE PGLFTLRIGR SSRDIHAETP LIVKSSTPAF
SFDTPWIDIQ TYEKAATIVA RFIGDEQTNA WIYGNPTLGD KLEDALKLKP EFAKDEAKRQ
KLKQEILQEI NSL