Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2889 |
Symbol | recN |
ID | 5388181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3260314 |
End bp | 3261975 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865889 |
Product | recombination and repair protein |
Protein accession | YP_001401852 |
Protein GI | 153950325 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000988342 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGTCC AATTAACCAT CAGCAACTTT GCTATTGTGC GTGAGTTAGA AATTGATTTT CAGCCCGGAA TGACGGCAAT CACTGGCGAA ACCGGGGCGG GCAAATCCAT TGCCGTAGAT GCACTAGGGT TATGCCTCGG GAATCGCTCA GATGGCAGCA TGGTGCGCTT AGGGGCAACA CGCGCTGACA TTTGCGCCCG CTTCTCACTG GCGGATACAC CATCTGCCCG CCAATGGCTG GAAAACAACC ATCTCGATGA CAATAATGAA TGCCTGTTGC GGCGCGCTAT TGGCGCTGAT GGCCGTTCAA GAGGCTTTAT TAATGGTACG CCTGTACCCG TATCCCAATT AAGAGAGTTG GGCCAACATC TAATTCAGAT CCACGGCCAA CACGCTCATC AACTGCTGCT CAAACCCGAT CATCAAAAAC AATTATTGGA TGCCTACGCA AATCAATCAT CTCTGTTGGC AGAAATGAAG GCAGCCTATC AAATTTGGCA TCAAAGTTGC CGTGATCTGG CACTTCACCA ACAACAGTCG CTGGAACGAA CTGCCCGCCG AGAGTTATTA CAATATCAAC TAAAAGAATT GAATTCATTT TCTCCACAGG CAGGGGAATA TGAACAAATT GATATTGAAT ACAAACGTTT GGCAAATAGC GGGCAATTAC TGTCCCTGAG TCAGCAGACT TTACAATTAC TGTCAGATGA TGAACAAAAC AATATCCTCA GCCAGCTTTA CGCTGCCAAA CATCAGTTGA CCGAGCTGGC CAGTATGGAC GAACAATTTA ATAATCTACT GAATATGTTA GAAGAAGCCT CAATCCAAAT CAGTGAAGCC AGTGATGAGT TACGTCACTA TGCGGAACAA TTAGATATGG ATCCAAATCG TCTATATGAG CTAGAAAAAC GGTTATCTCG GCAATTAAAT CTCGCGCGGA AACACCATGT AGCACCGGAA GAATTGCCAC AATTTCATCA GCAATTGCTG GATGAACAAG AACTGCTCTC ACAACAAGAA AATGATCACG AACAACTTAG TAATGCAGTA AATACTCACT ATCAGCAAGC ACTGGCAATA GCAAAACGGC TACACCAAGA GCGTCAATAT TATGCCAATG AACTGGCTGC ACTGATTACT GAAAGCATGC ATGAGCTATC GATGCCACAT GGCAAGTTCG CCATTGAAAC AATATTTGAG CCAGAACATC TTAGTGCGGA AGGGGCAACC CGAATTGAGT TCTGTGTCAC CACCAATCCA GGCCAACCCC TACAAGCACT GGTCAAAGTT GCATCTGGTG GTGAGCTGTC TCGCATCGCC TTGGCTATTC AGGTAATTAC AGCACGTAAA ATGGACACCC CAGCATTAAT CTTTGATGAG GTAGATGTAG GTATCAGCGG CCCAACGGCG GCCATAGTTG GCCGCCTGCT ACGTCAACTT GGCGAATCAA CTCAAGTCAT GTGCGTAACC CACCTTCCGC AAGTTGCCGG CTGTGGTCAT CAACATTTCT TTGTGAGTAA ACAAACCGAT GGTACTGAGA CTGAAACTCA TATGCATCGG TTAGATAAAA AAGCCCGCTT ACAAGAGTTG GCGCGTCTTC TGGGCGGTAG TGAGGTGACA AAAAACACCT TGGCAAACGC AAAAGAATTG CTTGCTGCAT AG
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Protein sequence | MLVQLTISNF AIVRELEIDF QPGMTAITGE TGAGKSIAVD ALGLCLGNRS DGSMVRLGAT RADICARFSL ADTPSARQWL ENNHLDDNNE CLLRRAIGAD GRSRGFINGT PVPVSQLREL GQHLIQIHGQ HAHQLLLKPD HQKQLLDAYA NQSSLLAEMK AAYQIWHQSC RDLALHQQQS LERTARRELL QYQLKELNSF SPQAGEYEQI DIEYKRLANS GQLLSLSQQT LQLLSDDEQN NILSQLYAAK HQLTELASMD EQFNNLLNML EEASIQISEA SDELRHYAEQ LDMDPNRLYE LEKRLSRQLN LARKHHVAPE ELPQFHQQLL DEQELLSQQE NDHEQLSNAV NTHYQQALAI AKRLHQERQY YANELAALIT ESMHELSMPH GKFAIETIFE PEHLSAEGAT RIEFCVTTNP GQPLQALVKV ASGGELSRIA LAIQVITARK MDTPALIFDE VDVGISGPTA AIVGRLLRQL GESTQVMCVT HLPQVAGCGH QHFFVSKQTD GTETETHMHR LDKKARLQEL ARLLGGSEVT KNTLANAKEL LAA
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