| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2880 |
|---|
| Symbol | sucB |
|---|
| ID | 5386528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3248858 |
|---|
| End bp | 3250081 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640865880 |
|---|
| Product | dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_001401843 |
|---|
| Protein GI | 153947240 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG TAGATATTAA TGTTCCTGAC CTCCCTGAGT CTGTAGCCGA TGGCTCTGTA
GCAACCTGGC ACAAAAAACC AGGCGACAGC GTCAAACGTG ATGAAGTGCT GGTTGAGATT
GAAACGGATA AAGTGATTTT GGAAGTGCCA GCCAGTCAGG ACGGTATTTT GGATGCCATT
CTGGAAGATG AAGGTGCCAC AGTGACGTCA CGTCAGGTGC TGGGGCGCAT TCGTCCAAGT
GATAGTTCTG GTAAACCGAC TGAAGAAAAA AGTCAGAGTA CGGAGTCAAC TCCGGCTCAA
CGCCAAACAG CCAGCTTGGA AGAAGAAAGT AATGAAACCC TCAGTCCGGC TATTCGCCGC
CTGATTGCTG AGCATGATCT CGATGCAACG GCAATCAAAG GCAGCGGTGT TGGTGGCCGT
ATCACCCGTG AAGACGTTGA TAGCCATTTA GCGAGCCGTA AATCGGCCTC TGCAGTGGTA
GCTGACGCTA AAGCGGTAGC CGCTGCTGCA CCTGTATTGG CGGGGCGTAG TGAGAAACGT
GTCCCGATGA GCCGTCTGCG TAAACGTGTT GCTGAGCGTC TGTTAGAAGC GAAAAACAGC
ACCGCAATGT TGACCACGTT TAACGAAATT AATATGCAGC CCATTATGGA CCTGCGTAAG
CAGTACGGTG AAGCTTTCGA GAAACGCCAC GGTGTACGTC TGGGCTTTAT GTCCTTCTAT
ATCAAGGCAG TGGTTGAAGC ACTGAAACGT TATCCTGAAG TGAATGCTTC TATTGATGGC
GAAGATGTTG TCTACCATAA CTATTTCGAT GTCAGTATTG CGGTTTCTAC TCCACGTGGT
TTGGTAACGC CAGTATTACG TGATGTAGAC ACGTTGAGCA TGGCTGATAT TGAGAAGAAA
ATAAAAGAAT TGGCTGTAAA AGGTCGTGAT GGCAAGCTGA AAGTTGAAGA GTTGACTGGC
GGTAACTTTA CCATTACCAA TGGTGGCGTG TTTGGCTCAC TGATGTCGAC ACCGATCATT
AACCCACCAC AAAGCGCGAT CCTTGGCATG CATGCCATCA AAGATCGCCC AATGGCGGTA
AATGGTCAGG TTGTGATCCT GCCTATGATG TATTTGGCAC TTTCCTACGA TCACCGTTTG
ATCGATGGCC GCGAGTCTGT TGGCTATCTG GTGACGGTAA AAGAGATGCT GGAAGATCCT
GCTCGCTTGC TACTTGATGT ATAA
|
|---|
| Protein sequence | MSSVDINVPD LPESVADGSV ATWHKKPGDS VKRDEVLVEI ETDKVILEVP ASQDGILDAI
LEDEGATVTS RQVLGRIRPS DSSGKPTEEK SQSTESTPAQ RQTASLEEES NETLSPAIRR
LIAEHDLDAT AIKGSGVGGR ITREDVDSHL ASRKSASAVV ADAKAVAAAA PVLAGRSEKR
VPMSRLRKRV AERLLEAKNS TAMLTTFNEI NMQPIMDLRK QYGEAFEKRH GVRLGFMSFY
IKAVVEALKR YPEVNASIDG EDVVYHNYFD VSIAVSTPRG LVTPVLRDVD TLSMADIEKK
IKELAVKGRD GKLKVEELTG GNFTITNGGV FGSLMSTPII NPPQSAILGM HAIKDRPMAV
NGQVVILPMM YLALSYDHRL IDGRESVGYL VTVKEMLEDP ARLLLDV
|
|---|
| |