Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2794 |
Symbol | urtA |
ID | 5384740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3159169 |
End bp | 3160437 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640865787 |
Product | urea ABC transporter, urea binding protein |
Protein accession | YP_001401758 |
Protein GI | 153948969 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGTC GTAACTTGAT TAAAGTTTTT GCGCTCTCGG CTTCGGTTAT CAGTATGGGA ATGGCATTTG GCACTCTGGC GGCTGACACC ATTAAAGTGG GTATTTTGCA TTCGTTGTCC GGCACGATGG CTATTTCTGA AACACCGTTA AAAGACATGG CGCTGATGAG TATTGATGAT ATCAATGCCC ATGGCGGTGT GTTGGGTAAG CAATTGGAAC CCGTGATCGT TGATCCTGCC TCTAACTGGC CGCTGTTTGC CGAGAAAGCG CGCCAACTGT TAACACAGGA TAACGTTGCC GTGGTGTTCG GCGGCTGGAC ATCTGTTTCC CGTAAATCGG TATTACCGGT ATTTGAAGAG TTGAACGGTT TATTGTTCTA TCCGGTGCAG TATGAAGGGG AGGAGATGTC GCCGAATGTG TTCTATACCG GTGCCGCGCC AAACCAGCAA GCCATTCCGG CGGTAGAGTA TTTATTGAGC GAAGAGGGCG GTGCGGCCAA GCGCTTTATT TTGTTGGGAA CGGATTATGT TTATCCGCGA ACGACCAACA AGATCCTGCG GGCATTTCTG CACACTAAGG GTATTGAAGA TAAAGATATC GAAGAAGTCT ATACCCCGTT TGGCTACAGC GATTACCAGA CCATTGTTGG CAATATTAAG AAGTTTTCAG CCGGGGGTAA AACGGCGGTG ATCTCTACCA TTAATGGTGA CTCTAACGTA CCGTTTTACA AAGAATTAGC CAATCAGGGC ATTAAAGCCA CCGATGTACC GGTGATCGCT TTCTCCGTTG GGGAGGAGGA GTTACGGGGT ATCGATACCA AACCACTGGT CGGTAACCTG GCTGCGTGGA ACTACTTCCA GTCCGTTGAT AACCCAACGA ATAAACAATT TGTTGAACAC TGGAAAGCCT ACGCCAAAGC GAACAAGTTA CCTAACGCCG ATAGCGCAGT CACTAATGAC CCGATGGAAG CCACTTGGGT GGGGATGCAC ATGTGGGCGC AAGCGGTGGA AAAAGCCCAA TCAACGGATG TGGATAAAGT CCGCGCAGCC ATGGCAGGGC AAACATATGC CGCCCCTTCG GGTTTTACGC TGACCATGGA CCAGACCAAT CACCATTTAC ATAAGCCAGT CATGATTGGC GAGATTGAAG CGGATGGCCA GTTCAATGTG GTATGGCAAA CCGATGCGCC AATCCGTGCC CACCCCTGGA GCCCGTTCAT CGCGGGTAAT GATAAGAAAC CCGATCATCC GGTAAAAAGC AGTCAGTAG
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Protein sequence | MQRRNLIKVF ALSASVISMG MAFGTLAADT IKVGILHSLS GTMAISETPL KDMALMSIDD INAHGGVLGK QLEPVIVDPA SNWPLFAEKA RQLLTQDNVA VVFGGWTSVS RKSVLPVFEE LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLLS EEGGAAKRFI LLGTDYVYPR TTNKILRAFL HTKGIEDKDI EEVYTPFGYS DYQTIVGNIK KFSAGGKTAV ISTINGDSNV PFYKELANQG IKATDVPVIA FSVGEEELRG IDTKPLVGNL AAWNYFQSVD NPTNKQFVEH WKAYAKANKL PNADSAVTND PMEATWVGMH MWAQAVEKAQ STDVDKVRAA MAGQTYAAPS GFTLTMDQTN HHLHKPVMIG EIEADGQFNV VWQTDAPIRA HPWSPFIAGN DKKPDHPVKS SQ
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