Gene YpsIP31758_2703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2703 
SymboluxuR 
ID5384900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3057632 
End bp3058375 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID640865693 
Productuxu operon transcriptional regulator 
Protein accessionYP_001401668 
Protein GI153949649 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTAT ATCAGGAAGT GGGCAGCCAA CTGCGGGAAG CGATTGTCAG TGGGCGATAC 
TCAGTGGGCG ATCGTTTACC ACCGGAGCGT GATATTGCCG AAAATTTCAG TGTCAGCCGT
AGTGTGGTGC GTGAAGCCCT GATTATGCTC GAGCTGGAGA AGCTGGTAGA AGTACGCAAA
GGCTCCGGTG TTTACGTGGT GAATGTGCCC ACGATGTCGC TTAATGGTGA GTCGGCTACG
TCAATCGATA GTGGCTACGG CCCGTTTGAA CTGCTACAAG CCCGGCAATT GTTAGAGAGC
GAAGTCGCGG CTTTTGCCGC AATGCAAGCC ACCAAAGCCG ATATCATTAA AATGCGTAAT
GCTATTGAGC AGGGAAAAGC CGCACTGACG GCTGGCGCGA TAGATGAAAG CGCTGATGAG
TTGTTTCATT GTTTGTTAGC GCAATCGACA CAAAATAGTG TGCTGGCCAA TATGGTTGCG
CAGACCTGGC AAGTCCGGAA AAGTAGTGCA ATGTGGCAGG GGGCGCATAG TCATACCGCC
GATTTTAGCT ACCGTTGGCA ATGGTTGGAT GATCACCAAA AAATCTTGCA AGCCGTGCTT
CGCCGCGACA GTAAAGCCGC TAAGCAGGCC ATGTGGCAGC ATTTGGAGAA TGTAAAATTG
AAGTTGCTGG AGATCTCTGA TGCTGACCAT CCAGATTTTG ATGGCTACTT ATTTGAGTCT
GCGCCATATC AGATTGAAGA GTAA
 
Protein sequence
MRLYQEVGSQ LREAIVSGRY SVGDRLPPER DIAENFSVSR SVVREALIML ELEKLVEVRK 
GSGVYVVNVP TMSLNGESAT SIDSGYGPFE LLQARQLLES EVAAFAAMQA TKADIIKMRN
AIEQGKAALT AGAIDESADE LFHCLLAQST QNSVLANMVA QTWQVRKSSA MWQGAHSHTA
DFSYRWQWLD DHQKILQAVL RRDSKAAKQA MWQHLENVKL KLLEISDADH PDFDGYLFES
APYQIEE