Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2610 |
Symbol | macB |
ID | 5385302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2964330 |
End bp | 2966279 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865599 |
Product | macrolide transporter ATP-binding /permease protein |
Protein accession | YP_001401575 |
Protein GI | 153949325 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCAT TGCTTGAATT AGAAGGCATC CGCCGTAGTT ATCAGTCTGG CGAAGAAATT GTCGATGTGT TGCAGGATGT CTCATTGACC ATCAATGCGG GTGAACTGGT CGCGATTATT GGCGCTTCTG GCTCGGGTAA GTCGACATTG ATGAATATCT TGGGATGTTT GGATAAACCC AGTGCCGGTA TTTATCGTGT CGCTGGGCAG AATGTTGATG AGTTGGATGA CGATGCGTTG GCGGCACTGC GCCGTGAACA TTTTGGTTTT ATTTTCCAGC GTTATCACCT GCTTCCGCAT CTCAGTGCCG CGCATAATGT GGAAGTCCCG GCGGTTTATG CAGGGTTGGG TAAACATGAG CGCCGTGAGC GAGCAAACAT GTTGTTGACC CGGCTGGGGC TGGGGGAACG TGTGAGCTAT CAGCCTAACC AGCTTTCAGG TGGGCAACAA CAACGGGTCA GTATTGCCAG GGCGCTGATG AATGGCGGGC AAGTTATCCT CGCCGATGAG CCTACTGGTG CGTTGGATAG CCATTCTAGT GTCGAGGTGA TGGCTATCCT GAAACAACTG CAACAACAGG GGCATACGGT CATTATTGTG ACTCATGATC CTACAGTTGC TGCGCAGGCT GAGCGAGTTA TTGAGATCAA AGATGGCCGT ATTATGGCCG ATTCAGGATC AAAAAATGAG CAAATCGTCG CGGCGGCGGA ACTGATGAGT TTAACGCCAG CGGCACCTTC ATGGCAGCAA CTGGTTGGCC GTTTCCGTGA GGCTCTGTTA ATGGCCTGGC GCGCCATGTC GGCGAATAAA ATGCGTACCG CGCTGACGAT GCTAGGTATC ATTATTGGTA TTGCGTCGGT GGTATCGATC TTGGTTGTCG GTGATGCCGC GAAGCAGCTT GTCTTGGCGG ATATTCGCGC TATCGGTACG AACACCATTG ATATCTATCC CGGTAAAGAT TTTGGTGATG ATGACCCCAG TACCCGCCAA GCGTTGGTAC ATGACGATAT GGCGGCATTG AAAGCGCAAT CTTACGTCAG TGCGGTATCT CCCTCTATCG GCGGCAGTAT GCGGCTGCGT TTTGGCAATA TTGATGTGGC AGCCAGTGTC TTGGGAGTCA GTGACGAGTA CTTTCGGGTA TTTGGTATGG CGATGGAACA AGGGGCACCT ATCACCCGCG AGCAGGTTGA GCGGCAGGCC CAGACCGTGG TTATTGACCT CAATACCCAA CGCCGCCTGT TCCCGCATAT GAAGGATGTG GTTGGGCAAG TGATATTGGT GGGCAATATG CCTGCGACTG TGGTTGGCGT GGTAGCAGAA AAAAAATCGA TGTTTGGCAG CAATAAAGCA CTGCGGGTGT GGGTGCCCTA CAGTACGATG GCCAACCGCT TGATGGGGCG CTCTTATTTT GATTCCATCA CGGTCCGGAT TAAAGAGGGG TACAGCAGTA AAGAGGCTGA ACAGCAGTTG GTCAGGTTGT TAACCTTGCG TCACGGCAAA AAAGACATAT TTACTTATAA TATGGATAGC CTGTTGCAGA CGGCTGAAAA AACAACGCAG ACTATGCAAT TGTTTCTAAC ATTGGTGGCG GTTATTTCAC TGGTGGTTGG CGGAATAGGC GTGATGAATA TTATGCTGGT TTCCGTAACC GAGCGGACGC GTGAGATCGG TATCCGTATG GCGGTGGGCG CGCGTTCCAG CGACGTTATG CAACAATTTT TGATTGAGGC GGTTCTGGTG TGCCTGATAG GTGGGGCGCT TGGTATAACA TTATCCTTTG CCATCGGGCT GATTGTGGAA ATGTTCTTAC CTAACTGGCG TATTACTTTC CCCCCTATGG CATTGTTCAG TGCATTTTTA TGTTCGACGG TAATTGGCGT GGTGTTTGGC TATTTACCTG CCCGCAGTGC CGCACGGCTT AACCCGATTG ATGCGTTAGC TCGTGAATAG
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Protein sequence | MAALLELEGI RRSYQSGEEI VDVLQDVSLT INAGELVAII GASGSGKSTL MNILGCLDKP SAGIYRVAGQ NVDELDDDAL AALRREHFGF IFQRYHLLPH LSAAHNVEVP AVYAGLGKHE RRERANMLLT RLGLGERVSY QPNQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSS VEVMAILKQL QQQGHTVIIV THDPTVAAQA ERVIEIKDGR IMADSGSKNE QIVAAAELMS LTPAAPSWQQ LVGRFREALL MAWRAMSANK MRTALTMLGI IIGIASVVSI LVVGDAAKQL VLADIRAIGT NTIDIYPGKD FGDDDPSTRQ ALVHDDMAAL KAQSYVSAVS PSIGGSMRLR FGNIDVAASV LGVSDEYFRV FGMAMEQGAP ITREQVERQA QTVVIDLNTQ RRLFPHMKDV VGQVILVGNM PATVVGVVAE KKSMFGSNKA LRVWVPYSTM ANRLMGRSYF DSITVRIKEG YSSKEAEQQL VRLLTLRHGK KDIFTYNMDS LLQTAEKTTQ TMQLFLTLVA VISLVVGGIG VMNIMLVSVT ERTREIGIRM AVGARSSDVM QQFLIEAVLV CLIGGALGIT LSFAIGLIVE MFLPNWRITF PPMALFSAFL CSTVIGVVFG YLPARSAARL NPIDALARE
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