Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2555 |
Symbol | pyrD |
ID | 5384876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2891132 |
End bp | 2892142 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640865544 |
Product | dihydroorotate dehydrogenase 2 |
Protein accession | YP_001401520 |
Protein GI | 153948054 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase |
TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.982288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTATC CACTTGTCAG AAAAGCACTA TTTCAGCTTG ATCCAGAACG TGCCCATGAA TTGACTTTTC GTCAGTTAAA GCGTGTTAGC GGCACACCTT TGGAATTTTT GGTACGCCAG TCGGTACCCA CCAAACCGGT CAGTTGTATG GGCCTGTCTT TTAAAAATCC AGTAGGTTTG GCTGCGGGCC TGGATAAAGA CGGTGAGTGT ATTGATGCCT TGGGCGCCAT GGGCTTTGGT TTCATTGAAG TGGGCACTGT GACACCACGG CCTCAGGTGG GGAATGATAA GCCGAGATTA TTCAGGATCG TCGAAGCTGA AGGTTTGATC AACCGTATGG GGTTTAATAA TCATGGGGTC GACAACCTTA TTGAAAATGT TAAAAAATCC CATTTTGGCG GTATATTGGG CATTAATATC GGCAAGAATA AAGATACGCC AGTCGAACAA GGTAAAGAAG ATTATCTGAT TTGCATGGAT AAAATTTATC CTTATGCTGG ATATATTGCG ATTAATATTT CCTCACCTAA TACACCGGGG TTACGATCCT TACAGTACGG TGAAGCATTA GATGATTTGT TAGCTGCAAT TAAAGATAAA CAAACTGAGC TACATCAACG CCATCATAAG TATGTTCCCG TAGCGGTGAA GATCGCGCCG GATCTTACTG AAGAGGAATT GATCCAAATA GCAGATAGTT TGGTCCGCCA TAATATTGAT GGCGTTATTG CTACTAATAC GACTTTAGAT CGTTCTCTGA TTCAGGGATT AAATTATTGC GAGCAAGCCG GTGGATTAAG TGGCCGCCCA TTACAATTAC GCAGTACTGA GGTTATTCAT CGTTTATCAC AAGAGCTAAA AGGGCGCCTG CCTATTATCG GTGTTGGTGG TATTGATTCC GTTACTGCAG CACGGGAAAA GATGGCGGCT GGTGCTTCAT TGATTCAAAT CTATTCCGGA TTTATCTTCC GTGGGCCGGG TTTGATTAAG AATATCGTCA CTCATATCTA A
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Protein sequence | MYYPLVRKAL FQLDPERAHE LTFRQLKRVS GTPLEFLVRQ SVPTKPVSCM GLSFKNPVGL AAGLDKDGEC IDALGAMGFG FIEVGTVTPR PQVGNDKPRL FRIVEAEGLI NRMGFNNHGV DNLIENVKKS HFGGILGINI GKNKDTPVEQ GKEDYLICMD KIYPYAGYIA INISSPNTPG LRSLQYGEAL DDLLAAIKDK QTELHQRHHK YVPVAVKIAP DLTEEELIQI ADSLVRHNID GVIATNTTLD RSLIQGLNYC EQAGGLSGRP LQLRSTEVIH RLSQELKGRL PIIGVGGIDS VTAAREKMAA GASLIQIYSG FIFRGPGLIK NIVTHI
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