Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2552 |
Symbol | rlmL |
ID | 5386018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2887040 |
End bp | 2889160 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640865541 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001401517 |
Protein GI | 153950189 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCTC TGTTTGCCAG CACGGCGCGT GGACTGGAAG AACTGTTAAA AAGCGAACTC GAAGCGCTGG GCGCTCACGA CTGTAAAATA GTACAGGGTG GGGTACATTT TCAGGGCGAC GATCGACTCA TGTACCAAAG CCTGTTGTGG AGCCGGTTGG CTTCGCGCAT CCTGTTGCCG CTCAACGAGT TTAAGGTCTA CAGTGATTTA GATTTGTACC TTGGGGTACA GGCTATCGAT TGGCCGTCAA TCTTTGGTGT GGACAAAACA TTTGCCGTAC ATTTTAGCGG TGTGAATGAC GAGATCCGTA ATAGTCAGTA TGGTGCGTTG AAAGTAAAAG ATGCGATTGT GGACAGCTTC ACGCGCAAAA TGGATCAACG CCCAACGGTT GCCAAACAAC AGCCTGATAT TCGGGTGAAC GTTTTCTTGC AACGGGATAT GGCCAGCGTG GCTCTTGATC TCAGTGGTGA GGGGCTACAT CAGCGTGGTT ATCGTGATTT GACCGGTCAG GCACCGCTGA AAGAGAATCT GGCGGCAGCG ATTATCCAGC GTTCTGGTTG GCAGCCAGGT ACGCCTATGG TCGATCCTAT GTGTGGCTCA GGGACTTTGC TGATTGAAGC CGCAATGATG GCCTCTGATC GTGCACCGGG TTTGCACCGG GGGCATTGGG GTTTTACTGC CTGGAATGCT TTTAATGAAG CGCTGTGGCG TGAACTGACC ACAGAAGCGC AAGTTCGTGC TCGTCGTGGC CTGCTAGAGA CTTCATCTCG CTTCTTTGGT TCAGATATTG ATCGTCGGGT CATCGAAATG GCGCGTGCGA ACGCTCGGCG GGCAGGTGTT GCCGAGTTGA TTACCTTCAA TGCTAACGAT ATCAGTAAGC TGGTGAATCC ATTACCTGAA GGGCCGGTGG GTACTGTTAT CAGCAACCCC CCTTACGGCG AACGGTTGGA AAGTGAGCCT GCATTGATTG CATTGCATAA TATGTTTGGC CGTATGATGA AAACCGCATT TGGCGGCTGG CGTCTGTCAC TGTTTAGTGC TTCTCCAGAA TTATTGAGCT GCCTGCAACT GCGAGCGGAT CGTGAATTTA AAGCCAAGAA TGGCCCGCTG GATTGCGTAC AGAAAAACTA TCAGTTGACG GCGAATCCAC AGGGGGCGGG GGGCGCGTTG GTGGCTGAAG ATTATGCTAA CCGTCTGCGT AAGAACGTGA AAAAACTGGA TAAGTGGGCG AAACAACAGG GTATCGAATG CTACCGTCTG TATGATGCCG ACCTACCGGA TTACAATGTT GCGGTCGATC GCTATGGCAG TAAAGTGGTG GTGCAGGAGT ATGCGCCGCC CAAAACGATC GATCCACAAA AAGCCCGTCA GCGCTTGTTT GATGTGATTA ATGCTACGTT GGCGGTGCTA GAACTGCCCT CTAATCAGTT GGTGTTGAAA ACGCGTGAGC GCCAGAAGGG TAAAAATCAA TACGAGAAAT TGGCCCAAAA GGGTGAATTC TTGCTGGTCA GTGAGTATAA CGCCAAGCTA TGGGTTAACC TGACTGACTA TCTTGATACT GGTCTGTTCC TGGATCACCG TATTGCCCGC CAGATGTTGG GCAAAATGAG CCAGGGCAAA GATTTCCTTA ACCTGTTTGC TTATACCGGT ACCGCCAGCG TCCATGCGGG GCTGGGCGGC GCGCGCAGCA CAACCACGGT AGATATGTCG CGTACCTATC TGGAGTGGGC AGAGAAGAAC TTGCGAGCGA ATGGCTTGAC GGGCCAGCAA CACCGCTTAA TTCAGGCGGA TTGCCTTTCT TGGCTCAGCA ACACTGATGA GCAATTCGAC GTGATCTTCA TTGATCCGCC GACCTTCTCT AACTCCAAGC GTATGGAAAC CACCTTTGAT GTTCAGCGCG ATCATTTAGT GCTGATGAAA GAACTTAAAC GGTTACTGCG TCGCAAGGGG ACAATCATGT TCTCGAACAA TAAGCGTGGT TTCCAGATGG ATCTGGCCGG GATAGCCGCG CTGGGGCTGG AAGCGAAAGA GATAACCGCA CTTACACAAT CTGAAGACTT TGCCCGTAAT CGTCAGATCC ACAATTGTTG GCTGGTCACC CACAGCCAAG AGGAAAAGTA A
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Protein sequence | MNSLFASTAR GLEELLKSEL EALGAHDCKI VQGGVHFQGD DRLMYQSLLW SRLASRILLP LNEFKVYSDL DLYLGVQAID WPSIFGVDKT FAVHFSGVND EIRNSQYGAL KVKDAIVDSF TRKMDQRPTV AKQQPDIRVN VFLQRDMASV ALDLSGEGLH QRGYRDLTGQ APLKENLAAA IIQRSGWQPG TPMVDPMCGS GTLLIEAAMM ASDRAPGLHR GHWGFTAWNA FNEALWRELT TEAQVRARRG LLETSSRFFG SDIDRRVIEM ARANARRAGV AELITFNAND ISKLVNPLPE GPVGTVISNP PYGERLESEP ALIALHNMFG RMMKTAFGGW RLSLFSASPE LLSCLQLRAD REFKAKNGPL DCVQKNYQLT ANPQGAGGAL VAEDYANRLR KNVKKLDKWA KQQGIECYRL YDADLPDYNV AVDRYGSKVV VQEYAPPKTI DPQKARQRLF DVINATLAVL ELPSNQLVLK TRERQKGKNQ YEKLAQKGEF LLVSEYNAKL WVNLTDYLDT GLFLDHRIAR QMLGKMSQGK DFLNLFAYTG TASVHAGLGG ARSTTTVDMS RTYLEWAEKN LRANGLTGQQ HRLIQADCLS WLSNTDEQFD VIFIDPPTFS NSKRMETTFD VQRDHLVLMK ELKRLLRRKG TIMFSNNKRG FQMDLAGIAA LGLEAKEITA LTQSEDFARN RQIHNCWLVT HSQEEK
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