Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2538 |
Symbol | yccS |
ID | 5387914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2868831 |
End bp | 2870969 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865526 |
Product | inner membrane protein YccS |
Protein accession | YP_001401503 |
Protein GI | 153950425 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666 [TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000319105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCACTT TCGTCACTGA TTTACGCCGT TATGCATACA ACAGTAGCCT GCTTTATCAT GCCCGTATTT TTATCGCTTT GGTGGGCGTA ACAGCCGTCC CATGGTGGAT TGAACAACCC AAACTGACTA TCCCATTAAC ATTAGGGGTC GTTGCCGCAG CACTGACAGA TCTTGATGAC CGCCTAACCG GGCGGTTACG TAACTTATTC ATTACGCTAA TTTGCTTTTT TGTAGCCTCA TCTTCAATTG AGTTGCTATT TCCTTACCCA TGGTTTTTTG CTCTCGGTCT GACCTTATCA ACCTGTGGCT TCACACTGCT AGGTGCATTA GGGCAGCGCT ATGCCACTAT TGCTTTCGGC GCGTTGCTCA TTGCTATTTA CACTATGCTA GGTGCCTCGA TGTACCCTAC TTGGTACCAG CAACCACTCT TACTGATATC AGGTGCTGTT TGGTATAACG TACTCACCTT ATTCGGCCAT CTTATTTTCC CTATCCGTCC CTTACAGGAT AATTTAGCCC GTTGTTACCA ACAGTTGGCT CATTATTTGG AAGCAAAGGC CAATTTGTTT GATCCAGATA TTGAATCTGA TATTAATCAA CCCTTAATCG ACGTGGCGAT GGTCAACAGT ACATTAGTAG CCACCTTGAA TCAGGCCAAA GCCTCACTCG TGACCCGACT AAAAGGTGAC CGTGGTCAAC GAGGCACTCG CCGGACACTT CACTATTATT TTGTTGCGCA AGATATCCAT GAGCGGGCCA GTTCATCTCA TTTTCAATAC CAGGTTCTGC GAGAAAAATT TCGTTACAGT GATGTTCTGT TCAGATTTCA GCGTTTACTG AGTATGCAAG CTAAGGCCTG TAACCAACTC TCCCAATCTA TTCTGATGCA TCAGAAATAC CAGCATGACC CACGTTTCGA ACGGGCATTT ACGTTCTTAG ATGCCGCACT GGCCAGAGAA GAGCTGGCTC ATCACGAAAA TACTCAGCAA GTTAAGGCAC TTTCCTACTT GCTAAAAAAT TTGCGCGCTA TTGATGCACA ACTGGCAGGG ATAGAGTCAG AGCAAGTCTT AGCGCAAGAC CCAACACCTG ATAACCATTT GTCAGATGAC CGCCTCACTG GCTGGAGTGA TATCAAACTA CGAATCAGCC GCCATTTAAC ACCGCAATCA GCACTATTTC GCCATGCAAT ACGCATGTCT ATTGTCTTGT GTGTGGGCTA CGCATTCATT CAATTCACTG GGTTACGCCA CGGTTATTGG ATCTTGCTGA CCAGCCTTTT TGTCTGCCAG CCAAACTATA GTGCGACCCG TCGCCGCCTT GCGCTACGCA TTATCGGCAC CTTAGCCGGT ATCCTTGTCG GTTTGCCTAT CCTTTATTTC GTTCCTTCTC TTGAGGGGCA ACTCACCCTG ATTGTGATCA GTGGTGTTCT GTTTTTTGCG TTCCGTAATG TCCAGTATGC TCACGCGACG ATGTTTATCA CCCTGCTAGT CTTATTGTGC TTTAACCTTT TGGGTGAAGG GTTTGAGGTG GCCGCACCAC GGGTGTTTGA TACCTTGTTG GGTTGTGCCA TTGCTTGGGT AGCCGTCAGT TTTATCTGGC CGGATTGGAA ATTTCGTCAA CTGCCTACGG TGGTTCATAA AACATTTAAT GCTAATTGCC GCTATCTGGA TGCCATTTTG GCGCAATATC ATCAAGGTAA GGACAATAGC TTACTTTATC GGGTTGCCCG CCGTGATGCA CATAATTGCG ATGCTGAATT AGCGTCAGTT ATTTCGAATA TGTCAGCGGA ACCCAAAAAC GATAAAGAAA CTCAGGAAGC GGCATTCCGC TTACTTTGCC TGAACCACAC CATGTTGAGC TATATTTCTG CTCTGGGTGC CCATCGTGAA AAATTGACCA ATAGCACCAC GCTAAATTTG CTCAATGATG CTATTTGCTA TATTGAGGGC ACCCTGGCGA AAGAACAACC AGACAACGCT AGAATGGCAA GTGCGTTAGC TGAGTTATCC AACCGGCTAC AGCACTGTCA TCCAGAACCA GAGAGCAGAG ACCTATTGGT CTTACAACAA ATTGGTTTGC TGCTTGAACT GCTACCGGAA CTCAGCGAAT TAAATAAACG TATTAGCCAG CCAGCCTAA
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Protein sequence | MFTFVTDLRR YAYNSSLLYH ARIFIALVGV TAVPWWIEQP KLTIPLTLGV VAAALTDLDD RLTGRLRNLF ITLICFFVAS SSIELLFPYP WFFALGLTLS TCGFTLLGAL GQRYATIAFG ALLIAIYTML GASMYPTWYQ QPLLLISGAV WYNVLTLFGH LIFPIRPLQD NLARCYQQLA HYLEAKANLF DPDIESDINQ PLIDVAMVNS TLVATLNQAK ASLVTRLKGD RGQRGTRRTL HYYFVAQDIH ERASSSHFQY QVLREKFRYS DVLFRFQRLL SMQAKACNQL SQSILMHQKY QHDPRFERAF TFLDAALARE ELAHHENTQQ VKALSYLLKN LRAIDAQLAG IESEQVLAQD PTPDNHLSDD RLTGWSDIKL RISRHLTPQS ALFRHAIRMS IVLCVGYAFI QFTGLRHGYW ILLTSLFVCQ PNYSATRRRL ALRIIGTLAG ILVGLPILYF VPSLEGQLTL IVISGVLFFA FRNVQYAHAT MFITLLVLLC FNLLGEGFEV AAPRVFDTLL GCAIAWVAVS FIWPDWKFRQ LPTVVHKTFN ANCRYLDAIL AQYHQGKDNS LLYRVARRDA HNCDAELASV ISNMSAEPKN DKETQEAAFR LLCLNHTMLS YISALGAHRE KLTNSTTLNL LNDAICYIEG TLAKEQPDNA RMASALAELS NRLQHCHPEP ESRDLLVLQQ IGLLLELLPE LSELNKRISQ PA
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