Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2492 |
Symbol | |
ID | 5388047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2815051 |
End bp | 2816652 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640865483 |
Product | ImpA domain-containing protein |
Protein accession | YP_001401461 |
Protein GI | 153947187 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGT TAACTACCTT GCTCACCGCT TGTGCCGCAG AGCCTGAGCC ACTTTTACAG CAGGCCAGAC AACAGGTTGC GCTCTGGGAA CGTTGGTTGC AACCGGTGAC ACCCGATAAG CATACCGGTG AAGACCCCGG TTACGATGAC CACTTCCAAC AGATGCGTGA AGAGGTCAAT AAGCTCTCGG GTGCCGATAC CACGCTGACC TGCGAGCTGG CTGAAAAGCT GTTCACCACA CACGGCAAGG ATGTGCGGGT GGCAACCTAT TACGTCTGGG CGCGGTTGCA CCGTGACGGC GAGGCCGGGC TGGCGGATGG CCTTTCCCTG CTGGCTGGGC TGATCACGCG CTTTGGTGAG GGCCTGCATC CGCTGCGTGC AACCAGCCGG AAAACCGCGT TGGAGTGGCT GGCCGGTTCC CGGATGCGCG ACAGCTTGTC ACTTTACCCG GAAGTGGATA AAGCCGATTT TGAGCGTATC GTGGGCGCAC TGGCCCTTAT CGAACAGGGG CTCAGTCTCT GGGACGAAGG TGTCCGGCCG CAACTGGGCG GGTTGTATAC CGCCCTGGAA AACCGCCTCG TGCAATCTGG TGGGCTAAAT GCCGTGGTGC CGCAAAACAG CAGCGGGTCA TCATCGGCAG GCAGCTTGAA CCCAGCCAAC ACGGCGTCAC CGGCGTTGCG GCCAGTGCAA TCGGGACGTG ACCTGCTCGA TCAGACCAAA ACGCTGGCAA AATACCTGCG CAACCAGCCG CAGGGCTGGC TCTCCGGGCA TCATCTTATC AAAAGCGTGC GCTGGGATAC GGTACACCAG TCACCGCCGT TGGATGTGAA CGGACGGACC CGGCTGGTAC CGCCGCGCCC GGAATATCGC GTACAACTCA AGCGCCTTTA TCTGCAACAA AACTGGCTGG CGTTGCTGGA ACAGGCCGAA TCGATATTTG CCGAAGGGGT TAACCATTTC TGGCTCGATG TGCAGTGGTA CCTGCATCAG GCCCTCAGCA AAGCGGGGGC CCCATTCGAT GGCTGGGCGA GCTGTATCAC GCAGGATTTA CGGTTATTAC TGACCCGGCT GCCGGGGCTG GAAGGGCTAT GCTGGAGTGA CGGCACGCCA TTTGCCGATG AGGTGACGCT GGGGTGGATA AACCAGCAGG TACTGGAGTC GGTCTCGGGC TGGGGCAGCG AGCCGGCCGC CGTTTCATCC GGTGAGGATG GCATTCTGTT GCTGGAGCCA GAAGCTTTGG CTCAGGCGGA CAGCGAAGGA ATTGAAGCGG CGCTTAACTG GTTGCAGTCA CGACCGGGGA TCACCACGGC GCGCCATCAG TGGCTGCTGC GTCTGGTGAT GGCCCGGGTG GCGGAGCAGT ACGGTAAGAA CGATATGGCC TTGCATCTGC TGAGTGGCCT TGATAGCAGC GGCGCGTTGT TGACCTTGCC ACAGTGGGAG CCGGGGTTGG TGTTTGAAGT TAAAGCCCGC CGTTTGAAGC TGTTGCGTAT GAAGGCACAG CGGGGTGACA GTGATAAAAC CCGCCTGCAT GCTGAAATGG AAAGCCTGCT CAGTGGGCTT ATCGCCCTCG ACCCGGCCCG TGCGGCCGTA TTATGCGGAT AA
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Protein sequence | MATLTTLLTA CAAEPEPLLQ QARQQVALWE RWLQPVTPDK HTGEDPGYDD HFQQMREEVN KLSGADTTLT CELAEKLFTT HGKDVRVATY YVWARLHRDG EAGLADGLSL LAGLITRFGE GLHPLRATSR KTALEWLAGS RMRDSLSLYP EVDKADFERI VGALALIEQG LSLWDEGVRP QLGGLYTALE NRLVQSGGLN AVVPQNSSGS SSAGSLNPAN TASPALRPVQ SGRDLLDQTK TLAKYLRNQP QGWLSGHHLI KSVRWDTVHQ SPPLDVNGRT RLVPPRPEYR VQLKRLYLQQ NWLALLEQAE SIFAEGVNHF WLDVQWYLHQ ALSKAGAPFD GWASCITQDL RLLLTRLPGL EGLCWSDGTP FADEVTLGWI NQQVLESVSG WGSEPAAVSS GEDGILLLEP EALAQADSEG IEAALNWLQS RPGITTARHQ WLLRLVMARV AEQYGKNDMA LHLLSGLDSS GALLTLPQWE PGLVFEVKAR RLKLLRMKAQ RGDSDKTRLH AEMESLLSGL IALDPARAAV LCG
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