Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2464 |
Symbol | |
ID | 5384647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2783152 |
End bp | 2783889 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640865455 |
Product | hypothetical protein |
Protein accession | YP_001401433 |
Protein GI | 153948508 |
COG category | [S] Function unknown |
COG ID | [COG2949] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAC GCCTGATTAT TAGCTTAATT ATCATCATTG GATTATTGAT GGTGACAGCT ATTGCGCTCG ATCGCTGGAT CAGTTGGAAA ACTGCGCCTT TTATCTACGA TGAACTCCAA GAACTGCCTC ACCGGCAGGT CGGTGTAGTA TTAGGTACAG CGAAATATTT TCGTACCGGT GGCATTAATC AGTTTTATCA ATACCGCATT CAAGGGGCAA TAAATGCCTA TAACAGCGGT AAGATCAGCT ATTTATTGCT CAGTGGTGAT AATGCCCAGC ACAGCTATAA CGAACCAATG ACCATGCGCC GCGACCTAAT CGCTGCAGGT GTTGCTCCCG CGGATATCGT GCTGGATTAT GCAGGTTTTC GGACTCTGGA CTCCATTGTG CGCACTCGCA AAGTCTTTGA TACTAATGAT TTCATTATTA TCACCCAACG CTTTCACTGT GAGCGGGCAT TATTTATCGC CATGTACATG GGCATTCAAG CACAATGCTT CGCAGTACCT TCACCAAAAA ATATGCTCAG CGTGCGAGTA CGGGAGATTT TTGCGCGCCT TGGTGCCCTG TCTGACCTCT ATATTCTTAA GCGGGAACCT CGCTTTCTTG GTCCATTGAT CCCCATTCCG GCCGTGCATG TGATACCAGA TGACGCACAA GGTTACCCAG CGGTAACACC CGATCAGTTA GTCGAACTGG AGCGCCGGTT GGCAGAAAAG AAACAACCAA GCCAATGA
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Protein sequence | MWKRLIISLI IIIGLLMVTA IALDRWISWK TAPFIYDELQ ELPHRQVGVV LGTAKYFRTG GINQFYQYRI QGAINAYNSG KISYLLLSGD NAQHSYNEPM TMRRDLIAAG VAPADIVLDY AGFRTLDSIV RTRKVFDTND FIIITQRFHC ERALFIAMYM GIQAQCFAVP SPKNMLSVRV REIFARLGAL SDLYILKREP RFLGPLIPIP AVHVIPDDAQ GYPAVTPDQL VELERRLAEK KQPSQ
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