| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2462 |
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| Symbol | cdd |
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| ID | 5387826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2779934 |
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| End bp | 2780818 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640865453 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001401431 |
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| Protein GI | 153947021 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAC GTTTTCACAC CTCTTGGGCT GAGTTACCCG CCTCATTACA ATTCGCACTA
GAACCTATTC TGAGCGCAGA AAACTTCCCT GCTATGCTGA CCGCTGAGCA AGTGAAAACA
GTAAAAAATA TCAGTGGCCT GGATGATGAT GCCTTGGCTT TTGCCTTGTT ACCGCTAGCA
ACCGCTTGTG CGCTTACGCC TATATCCCAT TTTAATGTGG GTGCCATTGC CCGTGGAAAA
AGTGGTAATT TTTATTTCGG TGCCAATATG GAGTTCCGTG GTGTACCACT GCAACAGACG
ATCCACGCCG AGCAATGCGC GGTAACCCAT GCCTGGCTGC GTGGTGAAAC CAATCTGGTT
GCGATCACTG TCAATTACAC GCCATGTGGC CATTGCCGCC AATTTATGAA TGAATTGAAC
AGTGGGTCTG AATTACATAT TCATCTACCT GGCCGCCCGC CATCAACACT GGGCCAATAT
TTACCAGACT CTTTTGGACC AACAGATTTA GCGATCACAA CACTTTTGAT GGACCCCGTG
AATCACGGTT ACACGCTAGC AGAAACCGAT CCCCTTACGC AGGCAGCGTT AAATGCTGCA
AATCATAGCC ATGCGCCATA CAGCCAATCC CACAGTGGTG TGGCACTAGA AACCACCAAT
GGAAAAATTT ATGCTGGCCG TTATGCTGAA AATGCCGCCT TTAACCCTAG CCTGCCCCCC
CTGCAAGCCG CGCTAATCTT GGCCAATATC ACCGGTGAGA ATTGTGCGTC GATCCGCCGC
GCTGTACTGG TTGAAGGCCA TAACGCAGTC ACGAGCCAGT GGGATACAAC CTTGGCGACA
TTGAACGCCT TGGGCTGTTC AGCGGTAAAA CGCGTGACGT TTTAA
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| Protein sequence | MQARFHTSWA ELPASLQFAL EPILSAENFP AMLTAEQVKT VKNISGLDDD ALAFALLPLA
TACALTPISH FNVGAIARGK SGNFYFGANM EFRGVPLQQT IHAEQCAVTH AWLRGETNLV
AITVNYTPCG HCRQFMNELN SGSELHIHLP GRPPSTLGQY LPDSFGPTDL AITTLLMDPV
NHGYTLAETD PLTQAALNAA NHSHAPYSQS HSGVALETTN GKIYAGRYAE NAAFNPSLPP
LQAALILANI TGENCASIRR AVLVEGHNAV TSQWDTTLAT LNALGCSAVK RVTF
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