| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2458 |
|---|
| Symbol | |
|---|
| ID | 5386386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 2775499 |
|---|
| End bp | 2776752 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640865449 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001401427 |
|---|
| Protein GI | 153949265 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5276] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAC AAGGTTCCTT GCCGATACCT GAATACAGCC GCAATATGCG GCTGATTGGT
CACAGTGACC AAGGTGGCAA ACCAGACGGT GTACAAGTTA TGGTGCATAG GGGCTATGCC
TATGTCGGCC ATATGGTATC GAAAGGCGTA TCAATTATTG ACGTAAGGGA TGCCAAAAAC
CCGCGTCCCG CAGGTTTCAT CGCTGCGCCT CCGAATACCT GGAATGTGCA TCTGCAAACT
CATGATGATC TGCTGCTGGT GATTAATGCA CGCGACCTAT TTGCCGATGC CCGTTTTGCC
GAAGAGAAAG TCTATTACAC CCGTTCAGTC GCCGAAACAG TCAGCACGCG TCAGGAAGGC
CGCAATTGGA GCGCGGGTTT ACGTATTTTT GATATTTCAA CGCCAGACAA GCCACGAGAA
ATCAGTTTCT TACCGCTTGA TGGCATTGGT ATCCATCGAA TCTGGTATGT CGGTGGGCGT
TGGGCGTATG TATCGGCACT GTTAGATGGC TATAGCGATT ATATCTTCCT CACCATTGAT
CTGGCTGATC CGCAAAAGCC ACAGGTTGCC GGACGCTATG CGTTACCTGG TATGGATACT
GCGGCAGGTG AACAGCCTAA CTGGCCAGCA GGCAAACGCT ATGCGCTGCA TCATGCCATT
ATTAGTGGCG ATACCGCTTA CGGCAGTTGG CGTGATGGTG GCCTAACATT ATTGGATGTC
AGTGATCGTC ACGAACCGAA ACTAATAAGC CACCGTAATT GGAGCCCCCC CTTTGGCGGC
GGTACTCATA CTGCTTTGCC ACTCCCTGAT CGTGATTTAT TGGTAGTACT GGATGAGGCC
GTGCTGGATA ACCAAGAAGA TGGCGAGAAA CATATCTGGG TGTTTGATAT TCGTGAACCA
AGTAACCCGG TGAGTATTTC AACGTTTCCG GTTCCGGAAG AACGAGATTA TATAAAAAAA
GGCGCTCATT TTGGCCCACA CAATCTGCAT GAAAACCGCC CAGGTAGTTT TATCAGTTCA
TCTCTAATTT TTGCTACTTA CCAAAATGCT GGGGTCCGAG CTTACGATAT CAGTAACCCC
TATCATCCAA AAGAAACTGG CGCGTTAGTT CCAGCAGCCC CCGAAAAAAT GATGGATAAG
CGCCCTGGTC GCCCACAAAT TATTCAATCA TGTGATGTAT TTGTTGACAC TCAAGGCATC
ATCTACAGTA CCGATTATAA CGGCGGCCTC TCTATCATCG AATATTTAGG TTAA
|
|---|
| Protein sequence | MATQGSLPIP EYSRNMRLIG HSDQGGKPDG VQVMVHRGYA YVGHMVSKGV SIIDVRDAKN
PRPAGFIAAP PNTWNVHLQT HDDLLLVINA RDLFADARFA EEKVYYTRSV AETVSTRQEG
RNWSAGLRIF DISTPDKPRE ISFLPLDGIG IHRIWYVGGR WAYVSALLDG YSDYIFLTID
LADPQKPQVA GRYALPGMDT AAGEQPNWPA GKRYALHHAI ISGDTAYGSW RDGGLTLLDV
SDRHEPKLIS HRNWSPPFGG GTHTALPLPD RDLLVVLDEA VLDNQEDGEK HIWVFDIREP
SNPVSISTFP VPEERDYIKK GAHFGPHNLH ENRPGSFISS SLIFATYQNA GVRAYDISNP
YHPKETGALV PAAPEKMMDK RPGRPQIIQS CDVFVDTQGI IYSTDYNGGL SIIEYLG
|
|---|
| |