| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2370 |
|---|
| Symbol | |
|---|
| ID | 5387859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 2670353 |
|---|
| End bp | 2671231 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640865359 |
|---|
| Product | PTS system mannose-specific transporter subunit IID |
|---|
| Protein accession | YP_001401339 |
|---|
| Protein GI | 153950357 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
|---|
| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0148959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATA CAACAACTGT TGATACAACA ACTGTTACTA AAACAACTAC CGGTGAAAAG
AAACTCACGG CCAGCGACAT TCGCGGTGTG TTTCTCCGTT CAAACCTCTT CCAAGGGTCG
TGGAACTTCG AGCGTATGCA GGCGCTGGGT TTCTGTTTCT CCATGGTGCC AGCGATCCGT
CGTCTGTATC CAGAGAACTC GGAAGAGCGT AAGCAGGCGA TCAAACGCCA TCTGGAATTC
TTCAATACCC AGCCTTTCGT GGCCGCGCCA ATTCTGGGCG TCACCTTGGC GATGGAAGAG
CAGAGAGCCA ATGGTGCTGA GATCGACGAT GCTGCAATTA ACGGCATTAA AGTGGGTCTG
ATGGGGCCAC TGGCCGGTGT CGGTGACCCG ATCTTCTGGG GTACCGTACG TCCAGTGTTT
GCGGCTCTCG GTGCGGGTAT CGCCATGAGC GGTAGCTTAC TGGGTCCATT GCTGTTCTTC
GTGCTGTTTA ACGTGGTGCG TTTGCTGACC CGTTATTACG GTGTGGCATA TGGCTACAAA
AAAGGCGTCA ATATCGTTAA TGATATGGGC GGCGGCTTCC TGCAGAAACT GACGGAAGGG
GCGTCTATCC TCGGCCTGTT TGTTATGGGG GCCTTGGTTA ACAAGTGGAC GCACGTCAAC
ATACCGGTGG TGGTGTCCAG GATAACCAAC CCGGCGGGCG AAACCACAGT AACAACGGTA
CAAACGATCT TGGACCAGTT GATGCCAGGC TTAGTGCCGC TGCTATTAAC CTTCGGTTGT
ATGTGGCTAT TGCGCCGTAA AGTTAACGCA CTGTGGATTA TTATGGGCTT CTTCGCTATC
GGTATCTTTG GCTACTGGAT TGGCTTCTTG GCACCATAA
|
|---|
| Protein sequence | MVDTTTVDTT TVTKTTTGEK KLTASDIRGV FLRSNLFQGS WNFERMQALG FCFSMVPAIR
RLYPENSEER KQAIKRHLEF FNTQPFVAAP ILGVTLAMEE QRANGAEIDD AAINGIKVGL
MGPLAGVGDP IFWGTVRPVF AALGAGIAMS GSLLGPLLFF VLFNVVRLLT RYYGVAYGYK
KGVNIVNDMG GGFLQKLTEG ASILGLFVMG ALVNKWTHVN IPVVVSRITN PAGETTVTTV
QTILDQLMPG LVPLLLTFGC MWLLRRKVNA LWIIMGFFAI GIFGYWIGFL AP
|
|---|
| |