Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2333 |
Symbol | flhA |
ID | 5384397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2634379 |
End bp | 2636457 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640865320 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_001401302 |
Protein GI | 153946907 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.243869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAATT TGGCCGCCCT GCTACGTTTA CCGGGCAATT TTAAAGACAC ACAGTGGCAA ATTCTCGCTG GGCCAATCCT GATCTTAATG ATCTTGTCGA TGATGATTTT GCCTCTGCCT CCATTCGCCT TGGATTTGTT GTTTACCTTT AATATTGCAC TTTCCATCAT GGTGTTACTG GTGGCCATGT TCACCCAGCG CACACTGGAT TTTGCCGCCT TTCCGACCAT CCTGTTGTTC TCTACTTTAT TGCGTCTATC ACTAAACGTG GCTTCCACGC GTATTATTCT GATGGATGGT CACACCGGGG GCGCGGCGGC CGGGCGAGTG GTTGAGGCAT TTGGTCACTT CCTGGTTGGT GGTAATTTTG CCATTGGTAT TGTGGTCTTT GTCATTTTGG TGGTGATCAA CTTTATGGTG ATCACCAAAG GGGCAGGGCG TATTGCTGAA GTGGGTGCCC GTTTCGTTTT GGATGGTATG CCCGGTAAAC AGATGGCGAT CGACGCTGAT TTAAATGCCG GATTGATCGG CGAAGATGAA GCGAAAAAAC GCCGCTCTGA CGTTACGCAA GAGGCTGATT TCTACGGTTC GATGGACGGG GCCAGTAAAT TTGTTCGCGG TGATGCGGTT GCTGGTTTGC TGATCATGGT GATTAACGTG GTGGGGGGGC TACTGGTCGG CGTGCTTCAG CACAACATGG CTTTTGGTCA TGCAGCAGAA ACCTATACCT TGCTCACCAT TGGCGATGGT TTGGTTGCTC AAATCCCTGC GCTGGTAATT TCGACCGCCG CAGGGGTGAT TGTCACTCGC GTCAGTACTG ATCAAGACGT TGGCCAGCAA ATGGTCACCC AACTGTTCAA CAACCCACGG GTGATGGTAT TAAGTGCCAG CGTACTGGGT CTGCTGGGAA TGGTGCCTGG GATGCCGAAT TTTGTCTTCC TGTTATTTAC CGCAGCGTTA CTGGCCTTGG CTTGGCGCTT ACGTGGTAAA CAAACACAGC AGTCTGTGGC GGTGGAAGCA CCCGTGGTGC AGGATCAGCA ACAGGGCGCA GAGGCGACAT GGGCAGATGT TCAACTGGAA GATCCGCTGG GGATGGAAGT GGGTTACCGC TTGATACCGA TGGTGGATTT CCAGCAAAAC GGTGAATTAT TGGGCCGAAT TCGTAGCATT CGCAAAAAAT TTGCGCAAGA GATGGGCTAC CTACCGCCAG TCGTGCATAT TCGCGATAAC CTGGAATTAC CCCCTGCTCA TTATCGGATA TTAATGAAAG GGGTCGAAAT TGGCAGTGGT GAGGCGCACC CAGGGCGCTG GCTGGCGATT AACCCCGGTA ACGCCGTCGG TACATTACCG GGTGAAGCCA CCCACGACCC GGCCTTCGGT CTGGCGGCGG TGTGGATAGA GAGTGCGTTA CGTGAGCAGG CACAAATTCA GGGCTTTACC GTGGTTGAGG CCAGCACGGT GGTGGCGACG CATTTGAACC ATTTGCTCAG CCAATATGCC AACGAGTTGT TCGGCCGTCA GGAAACTCAA CAGCTCCTTG ATCGTGTGAC GCAAGAGATG CCAAAGTTGA CCGAAGACTT TATCCCTGGG GTGGTGACAT TAACCACGTT ACATAAGGTC TTGCAAAATC TGTTAATGGA GCGGGTCTCG ATCCGCGACA TGCGCACCAT TATTGAAACA CTGGCCGAAC ATGCGCCAAA CCAGGCTGAT CCTTACGAAT TAACCGCGAC AGTGCGAGTG GCATTAGGGC GTTCAATTGC GCAGCAGTGG TTCCCTGGGA ATGGTGAAAT TCAGGTTATC GGGTTGGATG CTGCCTTGGA GCGCTTATTA TTACAAGCTC TGCAAGGGGG GAGTGGCTTG GAGCCGGGTC TGGCTGATCG TCTGCTGGAT CAATCCAAAC AAGCGTTGCA ACGCCAAGAG ATGCTAGGCG CACCGCCTGT ATTATTGGTT AATCATGCAC TACGGGCATT ATTGGCCCGC TTCTTGCGCC GTAGCTTGCC GCAAATGGTG GTGCTGTCTA ACCTGGAAAT TGGTGATAAC CGCCAGATTC GGATGACCTC GACGATAGGG TCCGCCTAA
|
Protein sequence | MANLAALLRL PGNFKDTQWQ ILAGPILILM ILSMMILPLP PFALDLLFTF NIALSIMVLL VAMFTQRTLD FAAFPTILLF STLLRLSLNV ASTRIILMDG HTGGAAAGRV VEAFGHFLVG GNFAIGIVVF VILVVINFMV ITKGAGRIAE VGARFVLDGM PGKQMAIDAD LNAGLIGEDE AKKRRSDVTQ EADFYGSMDG ASKFVRGDAV AGLLIMVINV VGGLLVGVLQ HNMAFGHAAE TYTLLTIGDG LVAQIPALVI STAAGVIVTR VSTDQDVGQQ MVTQLFNNPR VMVLSASVLG LLGMVPGMPN FVFLLFTAAL LALAWRLRGK QTQQSVAVEA PVVQDQQQGA EATWADVQLE DPLGMEVGYR LIPMVDFQQN GELLGRIRSI RKKFAQEMGY LPPVVHIRDN LELPPAHYRI LMKGVEIGSG EAHPGRWLAI NPGNAVGTLP GEATHDPAFG LAAVWIESAL REQAQIQGFT VVEASTVVAT HLNHLLSQYA NELFGRQETQ QLLDRVTQEM PKLTEDFIPG VVTLTTLHKV LQNLLMERVS IRDMRTIIET LAEHAPNQAD PYELTATVRV ALGRSIAQQW FPGNGEIQVI GLDAALERLL LQALQGGSGL EPGLADRLLD QSKQALQRQE MLGAPPVLLV NHALRALLAR FLRRSLPQMV VLSNLEIGDN RQIRMTSTIG SA
|
| |