Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2329 |
Symbol | |
ID | 5387507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2630391 |
End bp | 2633216 |
Gene Length | 2826 bp |
Protein Length | 941 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865316 |
Product | invasin |
Protein accession | YP_001401298 |
Protein GI | 153950815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.942783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGGG CTTCAGAAAA ATATGATGCT AACGCACCGC AACAGGTCCA GCCTTATTCT GTCTCTTCAT CTGCATTTGA AAATCTCCAT CCTAATAATG AAATGGAGAG TTCAATCAAT CCCTTTTCCG CATCGGATAC AGAAAGAAAT GCTGCAATAA TAGATCGCGC CAATAAGGAG CAGGAGACTG AAGCGGTGAA TAAGATGATA AGCACCGGGG CCAGGTTAGC TGCATCAGGC AGGGCATCTG ATGTTGCTCA CTCAATGGTG GGCGATGCGG TTAATCAAGA AATCAAACAG TGGTTAAATC GATTCGGTAC GGCTCAAGTT AATCTGAATT TTGACAAAAA TTTTTCGCTA AAAGAAAGCT CTCTTGATTG GCTGGCTCCT TGGTATGACT CTGCTTCATT CCTCTTTTTT AGTCAGTTAG GTATTCGCAA TAAAGACAGC CGCAACACAC TTAACCTTGG CGTCGGGATA CGTACATTGG AGAACGGTTG GCTGTACGGA CTTAATACTT TTTATGATAA TGATTTGACC GGCCACAACC ACCGTATCGG TCTTGGTGCC GAGGTCTGGA CCGATTATTT ACAGTTGGCT GCCAATGGGT ATTTTCGCCT CAATGGATGG CACTCGTCGC GTGATTTCTC CGACTATAAA GAGCGCCCAG CCACTGGGGG GGATTTGCGC GCGAATGCTT ATTTACCTGC ACTCCCACAA CTGGGGGGGA AGTTGATGTA TGAGCAATAC ACCGGTGAAC GTGTTGCTTT ATTTGGCAAA GATAATCTGC AACGCAACCC TTATGCCGTG ACTGCCGGGA TCAATTACAC CCCCGTGCCT CTGCTCACTG TCGGGGTAGA TCAGCGTATG GGGAAAAGCA GTAAGCATGA AACACAGTGG AACCTCCAAA TGAACTATCG CCTGGGCGAG AGTTTTCAGT CGCAACTTAG CCCTTCAGCG GTGGCAGGAA CACGTCTACT GGCGGAGAGC CGCTATAACC TTGTCGATCG TAACAATAAT ATCGTGTTGG AGTATCAGAA ACAGCAGGTG GTTAAACTGA CATTATCGCC AGCAACTATC TCCGGCCTGC CGGGTCAGGT TTATCAGGTG AACGCACAAG TACAAGGGGC ATCTGCTGTA AGGGAAATTG TCTGGAGTGA TGCCGAACTG ATTGCCGCTG GCGGCACATT AACACCACTG AGTACCACAC AATTCAACTT GGTTTTACCG CCTTATAAAC GCACAGCACA AGTGAGTCGG GTAACGGACG ACCTGACAGC CAACTTTTAT TCGCTTAGTG CGCTCGCGGT TGATCACCAA GGAAACCGAT CTAACTCATT CACATTGAGC GTCACCGTTC AGCAGCCTCA GTTGACATTA ACGGCGGCCG TCATTGGTGA TGGCGCACCG GCTAATGGGA AAACTGCAAT CACCGTTGAG TTCACCGTTG CTGATTTTGA GGGGAAACCC TTAGCCGGGC AGGAGGTGGT GATAACCACC AATAATGGTG CGCTACCGAA TAAAATCACG GAAAAGACAG ATGCCAACGG CGTCGCGCGC ATTGCATTAA CCAATACGAC AGATGGCGTG ACGGTAGTCA CAGCAGAAGT GGAGGGGCAA CGGCAAAGTG TTGATACCCA CTTTGTTAAG GGTACTATCG CGGCGGATAA ATCCACTCTG GCTGCGGTAC CGACATCTAT CATCGCTGAT GGTCTAATGG CTTCAACCAT CACGTTGGAG TTGAAGGATA CCTATGGGGA CCCGCAGGCT GGCGCGAATG TGGCTTTTGA CACAACCTTA GGCAATATGG GCGTTATCAC GGATCACAAT GACGGCACTT ATAGCGCACC ATTGACCAGT ACCACGTTGG GGGTAGCAAC AGTAACGGTG AAAGTGGATG GGGCTGCGTT CAGTGTGCCG AGTGTGACGG TTAATTTCAC GGCAGATCCT ATTCCAGATG CTGGCCGCTC CAGTTTCACC GTCTCCACAC CGGATATCTT GGCTGATGGC ACGATGAGTT CCACATTATC CTTTGTCCCT GTCGATAAGA ATGGCCATTT TATCAGTGGG ATGCAGGGCT TGAGTTTTAC TCAAAACGGT GTGCCGGTGA GTATTAGCCC CATTACCGAG CAGCCAGATA GCTATACCGC GACGGTGGTT GGGAATAGTG TCGGTGATGT CACAATCACG CCGCAGGTTG ATACCCTGAT ACTGAGTACA TTGCAGAAAA AAATATCCCT ATTCCCGGTA CCTACGCTGA CCGGTATTCT GGTTAACGGG CAAAATTTCG CTACGGATAA AGGGTTCCCG AAAACGATCT TTAAAAACGC CACATTCCAG TTACAGATGG ATAACGATGT TGCTAATAAT ACTCAGTATG AGTGGTCGTC GTCATTCACA CCCAATGTAT CGGTTAACGA TCAGGGTCAG GTGACGATTA CCTACCAAAC CTATAGCGAA GTGGCTGTGA CGGCGAAAAG TAAAAAATTC CCAAGTTATT CGGTGAGTTA TCGGTTCTAC CCAAATCGGT GGATATACGA TGGCGGCAGA TCGCTGGTAT CCAGTCTCGA GGCCAGCAGA CAATGCCAAG GTTCAGATAT GTCTGCGGTT CTTGAATCCT CACGTGCAAC CAACGGAACG CGTGCGCCTG ACGGGACATT GTGGGGCGAG TGGGGGAGCT TGACCGCGTA TAGTTCTGAT TGGCAATCTG GTGAATATTG GGTCAAAAAG ACCAGCACGG ATTTTGAAAC CATGAATATG GACACAGGCG CACTGCAACC AGGGCCTGCA TACTTGGCGT TCCCGCTCTG TGCGCTGTCA ATATAA
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Protein sequence | MAGASEKYDA NAPQQVQPYS VSSSAFENLH PNNEMESSIN PFSASDTERN AAIIDRANKE QETEAVNKMI STGARLAASG RASDVAHSMV GDAVNQEIKQ WLNRFGTAQV NLNFDKNFSL KESSLDWLAP WYDSASFLFF SQLGIRNKDS RNTLNLGVGI RTLENGWLYG LNTFYDNDLT GHNHRIGLGA EVWTDYLQLA ANGYFRLNGW HSSRDFSDYK ERPATGGDLR ANAYLPALPQ LGGKLMYEQY TGERVALFGK DNLQRNPYAV TAGINYTPVP LLTVGVDQRM GKSSKHETQW NLQMNYRLGE SFQSQLSPSA VAGTRLLAES RYNLVDRNNN IVLEYQKQQV VKLTLSPATI SGLPGQVYQV NAQVQGASAV REIVWSDAEL IAAGGTLTPL STTQFNLVLP PYKRTAQVSR VTDDLTANFY SLSALAVDHQ GNRSNSFTLS VTVQQPQLTL TAAVIGDGAP ANGKTAITVE FTVADFEGKP LAGQEVVITT NNGALPNKIT EKTDANGVAR IALTNTTDGV TVVTAEVEGQ RQSVDTHFVK GTIAADKSTL AAVPTSIIAD GLMASTITLE LKDTYGDPQA GANVAFDTTL GNMGVITDHN DGTYSAPLTS TTLGVATVTV KVDGAAFSVP SVTVNFTADP IPDAGRSSFT VSTPDILADG TMSSTLSFVP VDKNGHFISG MQGLSFTQNG VPVSISPITE QPDSYTATVV GNSVGDVTIT PQVDTLILST LQKKISLFPV PTLTGILVNG QNFATDKGFP KTIFKNATFQ LQMDNDVANN TQYEWSSSFT PNVSVNDQGQ VTITYQTYSE VAVTAKSKKF PSYSVSYRFY PNRWIYDGGR SLVSSLEASR QCQGSDMSAV LESSRATNGT RAPDGTLWGE WGSLTAYSSD WQSGEYWVKK TSTDFETMNM DTGALQPGPA YLAFPLCALS I
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