Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2301 |
Symbol | fliO |
ID | 5385134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2604521 |
End bp | 2605057 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640865288 |
Product | flagellar protein fliO |
Protein accession | YP_001401270 |
Protein GI | 153950895 |
COG category | [N] Cell motility |
COG ID | [COG3190] Flagellar biogenesis protein |
TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAG CCGCACCGGC CTCGACAATA CTGGCCTCGA CAACATTGGC CTCAACAACA ACACAGCAAA CCGCAACCAC AGGGTTTGCT GCCAGTCATC CGGGGTCGAA CAGTCAGTTA CAGCCGAGCA GTCAACTGCA ACCGCAATCA AGCGCCGCCA CCCCGGCCAT GCCTGCAGGG GGGGTGTTAA CGCAGGTGGG CAGTGCGCTG GGCGGTATTC TGTTATTGAT TCTGTTTGTG GCCTGGCTGG TGCGGCGGTT GGGGTTTGCC CCACAGGCCC GTAATAGCAA GCTACTGAAC GTGCGGGCCA GTTGTCAGGT TGGGCAACGT GAGCGGGTGG TGATTGTCGA AGTCGATGAC ACCTGGCTGG TATTGGGCGT TACGGCCCAA CAGGTTACCC CCTTGCATAC ACTGGCGCGT CCGGTGGTTG AGGCACCGCG ACAGGCGGAT GGCATACGAT CAACAAGCAA TGCGCAAGCG GCTGATTTTC GCCAACTGCT GAACAAAATA TTGAAACATC CGGAAAAATC GGCATGA
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Protein sequence | MTAAAPASTI LASTTLASTT TQQTATTGFA ASHPGSNSQL QPSSQLQPQS SAATPAMPAG GVLTQVGSAL GGILLLILFV AWLVRRLGFA PQARNSKLLN VRASCQVGQR ERVVIVEVDD TWLVLGVTAQ QVTPLHTLAR PVVEAPRQAD GIRSTSNAQA ADFRQLLNKI LKHPEKSA
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