| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2171 |
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| Symbol | |
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| ID | 5387216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2496695 |
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| End bp | 2497537 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640865158 |
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| Product | carbohydrate ABC transporter permease |
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| Protein accession | YP_001401144 |
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| Protein GI | 153947207 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.0580768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACT CACGCAGCAG GCGTTTACTC TGCCGTTACT TGGTTTCGTT TTACACGCTG
GGTTACGCCA TCTATCTGTC AGTCCACGAC ATCGATCTGA TGTCGCCTCC GCCATTTGAT
TTCATCGGCA TGGCGAACTT TATTGAGGTG TTACAAGAGC CACGGATGTG GTCATCCCTT
TGGAACACAC TGGTTTATGT GGCGGGTTCA ACGGTAGCAG AGTTGGTGCT TGGCAGTGCG
ATTGCGTTGT TTATAAGCCG TGACTTTTTT GGCCGTAAGC TGGTACGTGC GCTGTTACTG
CTGCCAATGA TTGTCACACC GATTGTTGCT GGGCTTATCT GGCGTATTTT TTACGATCCA
AACGCCGGTT TATTTAACTG GCTGGCCGGC CTGATCGGTA TTCCGCCGAT TGACTGGTTA
GGTAACCCCA GCACCGCGAT GGCTTCGTTG ATCCTGGCCG ATATCTGGCA GTGGACGCCG
TTTATCATTT TACTGGTTTC AGCCGGTCTG GATGCGTTAC CCAGTGAACC GCTAGAGGCG
GCCGAGCTGG ATGGCGCGCG CGGTTGGCGG CTACTGGCCT TTATTAAGCT ACCAATGATG
AAACCCATCA TTCTGATGGC GTTGTTCCTG CGGATGATCG ACGCCTTCAA ATCCTTCGAC
CTGATCTACG TGATGACCCG AGGTGGCCCG GCGTTGGCAA CGGAAACCAC CAACATGTAC
GCCTATCTTA CCGGGTTTCA GGATTTCCGT ATCAGCGCGG CGGTGGTGAT TGCCATCATC
AATACGCTAC TGGTGATCGC GGTACTGTCA TTTGCCAGTA AAAAGGTGAT GAAAGATGAG
TGA
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| Protein sequence | MQNSRSRRLL CRYLVSFYTL GYAIYLSVHD IDLMSPPPFD FIGMANFIEV LQEPRMWSSL
WNTLVYVAGS TVAELVLGSA IALFISRDFF GRKLVRALLL LPMIVTPIVA GLIWRIFYDP
NAGLFNWLAG LIGIPPIDWL GNPSTAMASL ILADIWQWTP FIILLVSAGL DALPSEPLEA
AELDGARGWR LLAFIKLPMM KPIILMALFL RMIDAFKSFD LIYVMTRGGP ALATETTNMY
AYLTGFQDFR ISAAVVIAII NTLLVIAVLS FASKKVMKDE
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