Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2166 |
Symbol | |
ID | 5388398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2492017 |
End bp | 2493294 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640865152 |
Product | hypothetical protein |
Protein accession | YP_001401139 |
Protein GI | 153949014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0114121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGT TATCTTCACT GTGCCTGCTC GGTTTTACCT TACCCAGTCA GGCACAATGT GTCTGGAAAG GGAGTGATAT TGGCGGGGAT AACTACGGTG CCTCACTGTA TTTAGGCAAT ATCAATATCA CCAGTAATTA TATTCAACCC GTCGATTCAA TTTTGGCCTC TAACGTCATC AGCTTAGTGC CCGCCCATCG GTGGCCAGAT CCAGAAGCCG TTATCTATGA ATGTGACATC GCCGATAAAG ACAGCTTATT TGAAGTGTTT GCTACCAATG GTGACAGCAA TGTTGGCGGC TACACCCATA TGGGTGATAA CTATTTTCAA ACGTTTTTCC CTTATACCGC GCTGAAACTG ATTCATGTCG ATTCAGGTGT TGAATTCACC CGTATCTGGC AAGAAATCCC ATTAAAAAAG TACGATATCC TTGACAATAA AATCCAGATA AAAGGTAAAC ACTTCAGCCA GATCCGCGCA GAGTTGAAAA AAACAGGCTC AGTAGATCGC TCACCCGGCC CGACCAGTTG GGGTTGCCCT GGACCGGCGG AGGACAACTA CTCAGGCGGC TATACCTGTA ATCAACCTAA TGGTTATGTG GTATTCAAAG GACCCGGCAT GGCGGTGCCA GAAGCAGGAT ATGATTCAGC GACGAATTAC CAAACTTGGG GAACGGGCCG CTATATGGCA TTTGGCATGA ACACATCCCC CATCACTATC CTGACGCGTA AAAATACCTG TGTAGTACGC AATGTGACGC CTTATGTAGT TTTCCCGATC ATTACAGTGA ATGAACTTAA TGATAACCAA ACACGCAGTG CTGAAATCAC AGTAGATATC GAGTGTCAGT CAGGTACCGA ATCAGGGACA TCCAGTGGCC AAACCGCCAT TGGGATCCAA ACCTCATTAC CGGGCTACCT TAAAGCGCTG GGATTAGGAT TGGTGAATAC GGCAGGAGGA GTGAGTTACT TGCTCTCAGA CAGTTACGGT ACTGATAGCC GTATCGCCAC TGGCGTGGGT ATCAGCCTAA GCGATAGCAA TGGCAGTACC ATGAATTTTG TTGGTTGGGG AGGATGTGCA CAGACTCAGG ACTGTCTAAC TACCGCCGAT GCGGGCTGGT ACCCGATACT CACTGGGGCC AGTGGTAATG GCAGCCACTC TGCAGGTTAC AACAATTATG TCCATCACTT CACTGCCACC TTAAAAAAAC TGCCTAATGG TCACCCTACT GCGGGGAAGA TCGATGCCAC AGCTTACGTT CTGGTGAAAA TACAATGA
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Protein sequence | MSVLSSLCLL GFTLPSQAQC VWKGSDIGGD NYGASLYLGN INITSNYIQP VDSILASNVI SLVPAHRWPD PEAVIYECDI ADKDSLFEVF ATNGDSNVGG YTHMGDNYFQ TFFPYTALKL IHVDSGVEFT RIWQEIPLKK YDILDNKIQI KGKHFSQIRA ELKKTGSVDR SPGPTSWGCP GPAEDNYSGG YTCNQPNGYV VFKGPGMAVP EAGYDSATNY QTWGTGRYMA FGMNTSPITI LTRKNTCVVR NVTPYVVFPI ITVNELNDNQ TRSAEITVDI ECQSGTESGT SSGQTAIGIQ TSLPGYLKAL GLGLVNTAGG VSYLLSDSYG TDSRIATGVG ISLSDSNGST MNFVGWGGCA QTQDCLTTAD AGWYPILTGA SGNGSHSAGY NNYVHHFTAT LKKLPNGHPT AGKIDATAYV LVKIQ
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