Gene YpsIP31758_2075 details

Gene Information

• Locus tag: YpsIP31758_2075
• Symbol: ychF
• ID: 5384282
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 2387631
• End bp: 2388722
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640865061
• Product: GTP-dependent nucleic acid-binding protein EngD
• Protein accession: YP_001401048
• Protein GI: 153947042
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0012] Predicted GTPase, probable translation factor
• TIGRFAM ID: [TIGR00092] GTP-binding protein YchF

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.0577109
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATTCA AATGCGGTAT TGTGGGCCTG CCTAACGTCG GTAAATCCAC CCTGTTCAAC 
GCGTTGACAC AAGCGGGTAT TGAAGCAGCT AACTTCCCGT TCTGCACCAT CGAGCCCAAC 
ACCGGTGTCG TGCCAATGCC GGACCCGCGT CTGGACCAAT TGGCTGAGAT TGTTAAGCCG 
CAACGTATCT TGCCAACAAC CATGGAATTC GTGGATATCG CAGGGCTGGT AAAAGGGGCT 
TCCAAAGGCG AAGGCTTGGG TAACCAGTTC CTGACCAATA TCCGTGAAAC CGAAGCAATT 
GGTCACGTGG TGCGTTGTTT TGAAAATGAC AACATCATCC ATGTCGCCGG GAAAGTTGAT 
CCAGCGGATG ACATCGAAAC AATCAATACC GAACTTGCCC TCTCCGATTT AGAAACCTGC 
GAACGTGCCA TTCATCGTGT CCAGAAAAAA GCCAAAGGCG GTGATAAAGA CGCAAAAGCT 
GAACTGGAAG CACTGGAGAA ATGCCTGCCA CATTTAGAGA ATGCAGGCAT GTTGCGCGCC 
TTGGATCTGA CGGCTGAAGA TAAAGCCGCT ATCCGCTACC TGAGTTTTCT GACGCTGAAA 
CCGACTATGT ACATTGCCAA CGTCAATGAA GATGGTTTCG AAAACAACCC GTATCTGGAT 
CAGGTGCGCG CTATTGCGGC GGCGGAAGGT TCGGTTGTCG TTGCGGTTTG TGCTGCGGTT 
GAGTCTGATA TTGCAGAAAT GGAAGATGAA GATCGTGCTG AATTTATGGC CGAACTGGGC 
ATTGAAGAGC CGGGGCTGAA CCGTGTTATC CGTGCTGGTT ATGAATTACT GAATCTACAA 
ACCTACTTCA CCGCGGGTGT CAAAGAAGTC CGTGCCTGGA CCATCCCCGT GGGTGCCACG 
GCACCACAGG CCGCAGGTAA GATTCATACC GACTTCGAGA AAGGCTTTAT CCGTGCACAA 
ACTATCGCGT TTGATGACTT TATCACCTAC AAAGGTGAGC AAGGCGCGAA AGAAGCCGGA 
AAGATGCGTT CAGAAGGTAA AGAATACATT GTTAAAGATG GTGATGTGAT GAACTTCCTA 
TTTAACGTCT AA 

 

Protein sequence

MGFKCGIVGL PNVGKSTLFN ALTQAGIEAA NFPFCTIEPN TGVVPMPDPR LDQLAEIVKP 
QRILPTTMEF VDIAGLVKGA SKGEGLGNQF LTNIRETEAI GHVVRCFEND NIIHVAGKVD 
PADDIETINT ELALSDLETC ERAIHRVQKK AKGGDKDAKA ELEALEKCLP HLENAGMLRA 
LDLTAEDKAA IRYLSFLTLK PTMYIANVNE DGFENNPYLD QVRAIAAAEG SVVVAVCAAV 
ESDIAEMEDE DRAEFMAELG IEEPGLNRVI RAGYELLNLQ TYFTAGVKEV RAWTIPVGAT 
APQAAGKIHT DFEKGFIRAQ TIAFDDFITY KGEQGAKEAG KMRSEGKEYI VKDGDVMNFL 
FNV