| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2059 |
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| Symbol | |
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| ID | 5386745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 2372111 |
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| End bp | 2373193 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640865044 |
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| Product | putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein |
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| Protein accession | YP_001401032 |
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| Protein GI | 153947363 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.791804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CACTGATAAC GCTAATGAGC GGGCTGTTAT TCAGTTCGCT AACACTCGCA
GCCCAGACCA GCGACTGGGA CTCTGTGGTT GCGCAGGCAA AAAAAGAAGG CAGCGTGACT
TTTAACGTTT GGTATCTACA ACCACAGTGG CGCAGTTTTG TGAAAAATTT TGAACAAAAG
TACGACATCA AGGTGCGTAT TCCAGAAGGC AGCATTGACG GCAATATGAA CAAATTGCTG
GCAGAGACAC GCCGGGAGCA AGGGAAGATC GATGTCATTG CCCTCTCTAT CGCACAATTA
CCGATCACGA TGGGCGCGAA ATCACTGGCT AAAGTGGATG ATTTACCGGG TTATCAGGAT
GCGTATCACC AGTTACAGAA CGTCGATACC CAAGGTTACG CCGTAGCATT CTGGGGCAAC
CAGACCGGTT TTGCCTACGA TCCCCAACAG ATGGGTGATC GACCATTGCC ACAGACCATG
GAGGAATTCC AACGTTTTAT CGACGCCAAT CCGAAGCGGT TCGGTTATAA CGATCCGAAC
AACGGGGGGG CGGGGGAAGC CTTTATCCAA CGCATCGTCA CCACGCTGAG CGGCGACTTT
AGCAGCGAGT CTGACACTGT TGACCCAACG GTAATAAAAA ACTGGCAGAA AGGTTGGCAG
TGGTTTGCGT CCAATAATAA CAATATTACC CGCACGGCGT CCGGTGCCGA TAGCCTGACA
CGCCTCAACG ATGGCGAACT AATGCTGACA CCTGCCTGGG AAGACCACCT CTCCGGCTTA
CAAAAGACCG GCGCAATCAC CTCTAGGTTG AAATTCTATG TGCCTGAGTT TGGTATGCCC
GGCGGTGGCA ATATTGCCAG TATCGCAGCC AACAGCCCGC ATCCGGCGGC CTCCAGAGTG
TTCCTAAACT GGCTGATTCA GGCAGATACC CAGAAAGCGC TGAACGAGGC GTTCGGTTCC
ACCCCAATGA ACAAGCAACT GAATGCTGAT GTAAAACAGC CTGACACACC CGTTCAGTTT
TACGGTAAGG CGTACAGTAT GCAGATGAAA AAAGAGTTTG CTCGTCAGGT AATGACACGA
TAA
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| Protein sequence | MKKTLITLMS GLLFSSLTLA AQTSDWDSVV AQAKKEGSVT FNVWYLQPQW RSFVKNFEQK
YDIKVRIPEG SIDGNMNKLL AETRREQGKI DVIALSIAQL PITMGAKSLA KVDDLPGYQD
AYHQLQNVDT QGYAVAFWGN QTGFAYDPQQ MGDRPLPQTM EEFQRFIDAN PKRFGYNDPN
NGGAGEAFIQ RIVTTLSGDF SSESDTVDPT VIKNWQKGWQ WFASNNNNIT RTASGADSLT
RLNDGELMLT PAWEDHLSGL QKTGAITSRL KFYVPEFGMP GGGNIASIAA NSPHPAASRV
FLNWLIQADT QKALNEAFGS TPMNKQLNAD VKQPDTPVQF YGKAYSMQMK KEFARQVMTR
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