Gene YpsIP31758_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2028 
SymbolznuC 
ID5384604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2335379 
End bp2336140 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content49% 
IMG OID640865012 
Producthigh-affinity zinc transporter ATPase 
Protein accessionYP_001401001 
Protein GI153946931 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000463637 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCCA TATTGGTAAC GCTTAATAAG ATATCCGTCA CTTTTGGCTC TCGCCGGGTA 
CTGAACGATA TTTCCCTTTC TCTGCGCCCA GGGAAAATCC TTACGCTGCT TGGGCCAAAT
GGCGCAGGAA AATCCACACT GGTACGGGTG GTTCTTGGCC TTATTCCCCC AAGTAGTGGA
TCTCTGGTTC GTGAGCCTGG CTTACGCATC GGTTATGTTC CGCAAAAATT GCATTTAGAT
GCCACATTGC CCCTAACTGT CAGCCGCTTT ATGCGGCTAA AGCCGGGGGT GAAAAAAGCC
GACATTCTGC CTGCACTCAC ACGGGTGCAG GCCGCTCATT TGCTGGATCA ACCCATGCAA
AAGCTTTCGG GCGGTGAAAA TCAGCGTGTG CTCCTCGCCC GAGCCTTACT GAACCGTCCA
CAGTTGCTGG TGTTGGATGA ACCAACGCAA GGGGTCGATG TCAATGGCCA GTTAGCGCTA
TATGATTTAA TCGAACAACT ACGAAAAGAG TTAGGTTGTG CTGTGTTAAT GGTTTCCCAT
GATTTGCATT TGGTGATGGC CAAAACTGAT GAAGTATTGT GCCTTAATCA ACATATCTGT
TGTTCAGGCG CACCAGAGGT GGTTTCAACC CACCCCGAGT TTATTGCCAT GTTTGGTAAT
CGTGGTGCCG AGCAGTTAGC CGTTTATCGT CATAACCATA ATCATCGTCA CGACTTGCAT
GGAAAAATTA TTTTGAAAAA CAGCGGGAGC CGTGGCGCAT GA
 
Protein sequence
MMPILVTLNK ISVTFGSRRV LNDISLSLRP GKILTLLGPN GAGKSTLVRV VLGLIPPSSG 
SLVREPGLRI GYVPQKLHLD ATLPLTVSRF MRLKPGVKKA DILPALTRVQ AAHLLDQPMQ
KLSGGENQRV LLARALLNRP QLLVLDEPTQ GVDVNGQLAL YDLIEQLRKE LGCAVLMVSH
DLHLVMAKTD EVLCLNQHIC CSGAPEVVST HPEFIAMFGN RGAEQLAVYR HNHNHRHDLH
GKIILKNSGS RGA