Gene YpsIP31758_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2024 
SymbolpykA 
ID5386906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2330002 
End bp2331444 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content50% 
IMG OID640865008 
Productpyruvate kinase 
Protein accessionYP_001400997 
Protein GI153950254 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0139067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAC GGCTCAGAAG GACCAAGATT GTTACTACAC TGGGGCCGGC TACTGACCGC 
GACAATAATC TGGAAAAGAT TATTGCTGCA GGTGCGAACG TAGTCCGCCT GAATTTTTCC
CATGGTAGCG CTGAAGATCA TGAATTACGG GCCAATAAAG TCCGTGAAAT CGCTGCCAGA
CTGGGGCGTC ATGTAGCTAT TCTTGGTGAT TTGCAAGGTC CTAAAATCCG GGTATCGACG
TTTAAAGAAG GTAAAGTTTT CCTTAATATA AACGATAAAT TCCTGCTGGA TGCCAATATG
GCAAAAGGCG AAGGTGATAA AAACAAAGTG GGTATCGATT ACAAAGGCCT GCCAGCTGAT
GTGGTTCCCG GTGATATTTT ATTGCTTGAT GATGGCCGCG TGCAGTTAAA AGTGGTTGAA
GTTCAGGGCA TGAAAGTCTT CACCGAAGTG ACCGTCGGTG GCCCGCTCTC TAACAATAAA
GGCATCAACA AGTTAGGTGG CGGGTTATCA GCCGAAGCCC TAACCGAAAA AGATAAAGCC
GATATTGTTA CCGCTGCAAA AATTGGTGTG GACTTCCTGG CGGTCTCTTT CCCACGTACT
GGTGAAGATT TGCATTATGC ACGCCGCCTG GCCCGTGATG CTGGCTGCAA TGCACAGATC
GTCGCAAAGG TTGAGCGCGC TGAAGCGGTC GCCACTGATG AGGCGATGGA TGATATCATT
CTGGCCTCTG ACGTCGTCAT GGTCGCTCGT GGTGATTTGG GTGTTGAAAT TGGCGACCCA
GAACTTGTTG GTATCCAAAA GAAACTGATC CGCCGTGCCC GCCAGCTAAA CCGTGCCGTG
ATCACGGCGA CTCAGATGAT GGAGTCAATG ATCACCAACC CGATGCCAAC CCGAGCAGAG
GTGATGGATG TTGCCAACGC AGTGCTGGAT GGTACCGATG CGGTCATGTT GTCAGCAGAA
ACAGCAGCAG GCCAGTACCC GGCAGAAACC GTAGCGGCAA TGGCGCGTGT CTGTCTAGGC
GCGGAAAAAA TCCCAAGCAT CAATGTGTCA AAACACCGTC TAGATGTGCA ATTCGATAAC
GTCGAAGAAG CTATCGCGAT GTCGACCATG TATGCGGCAA ACCACCTCAA AGGTATCACC
GCGATTATCG CCATGACTGA ATCAGGCCGC ACGGCTTTGA TGATGTCGCG TATCAGTTCC
GGTTTACCTA TTTTCGCCAT GTCGCGCCAT GATCATACTT TAAACCTAAC CGCCATCTAT
CGTGGCGTGA CGCCGGTCTA TTGTGATCCC CATACTGACG GTGTTCTTGC CGCCACAGAA
GCAGTAAAAC GCTTGCAAGA TAAAGGGTTC TTGGTGTCAG GTGATTTGGT TATCGTTACT
CAGGGCGATG TGATGGGCAC CATTGGTACG ACCAATACCA GTCGTATCAT CCGCGTCGAA
TAA
 
Protein sequence
MSRRLRRTKI VTTLGPATDR DNNLEKIIAA GANVVRLNFS HGSAEDHELR ANKVREIAAR 
LGRHVAILGD LQGPKIRVST FKEGKVFLNI NDKFLLDANM AKGEGDKNKV GIDYKGLPAD
VVPGDILLLD DGRVQLKVVE VQGMKVFTEV TVGGPLSNNK GINKLGGGLS AEALTEKDKA
DIVTAAKIGV DFLAVSFPRT GEDLHYARRL ARDAGCNAQI VAKVERAEAV ATDEAMDDII
LASDVVMVAR GDLGVEIGDP ELVGIQKKLI RRARQLNRAV ITATQMMESM ITNPMPTRAE
VMDVANAVLD GTDAVMLSAE TAAGQYPAET VAAMARVCLG AEKIPSINVS KHRLDVQFDN
VEEAIAMSTM YAANHLKGIT AIIAMTESGR TALMMSRISS GLPIFAMSRH DHTLNLTAIY
RGVTPVYCDP HTDGVLAATE AVKRLQDKGF LVSGDLVIVT QGDVMGTIGT TNTSRIIRVE