Gene YpsIP31758_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2019 
SymbolmdtI 
ID5387709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2324636 
End bp2324965 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content48% 
IMG OID640865003 
Productmultidrug efflux system protein MdtI 
Protein accessionYP_001400992 
Protein GI153947178 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.993103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGC TTGAGTTTTA CCCTATAGCT TTCTTGATCT TGGCCGTTAT GCTGGAAATC 
GTCGCTAATA TCTTGCTGAA AATGTCAGAT GGCTTTCGCC GAAAATGGTT GGGGATATTG
TCCCTGTTGT CAGTATTAGG CGCATTCAGT GCGTTGGCGC AAGCAGTGAA GGGGATTGAG
CTGTCGGTAG CTTATGCCTT GTGGGGCGGT TTTGGTATTG CGGCCACTGT TGCAGCGGGC
TGGATTCTGT TTAATCAACG GTTGAACTAC AAAGGTTGGA TTGGTTTGAT CTTACTGCTG
GCGGGCATGG TGATGATTAA GTTGTCATAG
 
Protein sequence
MQQLEFYPIA FLILAVMLEI VANILLKMSD GFRRKWLGIL SLLSVLGAFS ALAQAVKGIE 
LSVAYALWGG FGIAATVAAG WILFNQRLNY KGWIGLILLL AGMVMIKLS