Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2000 |
Symbol | nhaB |
ID | 5387767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2304051 |
End bp | 2305625 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864984 |
Product | sodium/proton antiporter |
Protein accession | YP_001400973 |
Protein GI | 153948432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3067] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0154375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACATTA CCAACAGACA AGCTGTACTC AAGAATTTTC TTGGTAACTC TCCGGATTGG TACAAACTAG CAATTATGGG GTTCTTGATC ATTAACCCTC TAGTCTTCTT CTTTGTCAGC CCCTTTGTCG CGGGCTGGAT GCTGGTTATC GAGTTTATCT TTACCTTAGC CATGGCGCTG AAATGTTACC CGCTGCAACC GGGGGGTTTG CTCGCTATTC AAGCCGTTGC CATCGGCATG ACCAGCCCGC ATCAAGTTGC AGAAGAGATC GCCAATAACC TGGAAGTCCT CTTGCTTTTA GTATTTATGG TGGCCGGCAT CTACTTTATG AAACAGCTGC TGCTGTTTGT ATTTACGAAA TTGCTGTTGA ATATTCGGTC AAAAACTATC CTTTCCCTGG CCTTTTGTCT GGCGTCAGCC TTCCTATCAG CATTTTTGGA TGCCTTAACC GTAATCGCGG TAGTTATCAG CGTATCCGTT GGTTTTTATA CTATTTATCA TAACGTTACT TCAAATCACA GTGACAAAGA TATTACTGAT GACAGCGGAA TCGATAATCA GGACAGCCAT GAAACATTAG AGCAATTCCG GGCATTTTTA CGCAGTCTGA TGATGCATGC TGGCGTGGGT ACCGCTCTGG GGGGCGTCAT GACAATGGTT GGTGAGCCTC AGAATTTGAT TATTGCCAAA AGCGCGGGTT GGAATTTTGC TGACTTCTTT ATTCGCATGT TACCCGTCAC CTTACCCGTC TTTATTTTCG GGTTATTGGT CTGCTTGCTG GTCGAAAAAT TTAAACTGTT TGGTTATGGT GCCCAGTTGC CAGAACGTGT GCGTCAGGTT CTGACCGAAT ACGATCAGCA AGCCAGTGCG AAACGGACCA AGCAAGAGAA GATGAAGTTA ATAGTACAAG CCATTATTGG TGTCTGGTTG GTATTGGCAC TGGCACTCCA TTTAGCTGAA GTCGGTTTGG TCGGGCTATC CGTTATTATT CTCGCCACCT CATTTTGTGG TATCACAAAT GAGCATTCAT TGGGCAAAGC CTTTCAGGAA GCCTTGCCGT TTACCGCGCT GCTAACCGTA TTTTTTGCCG TGGTCGCGGT TATTATTGAA CAAAGCCTCT TTACCCCCAT TATTCAGTTT GTTTTACAAG CCTCGCCTTC CGCTCAGCTA TCGCTGTTTT ATCTGTTTAA TGGCTTGCTC TCATCGGTGT CAGACAATGT TTTTGTCGGT ACCGTGTATA TCAATGAGGC CCGTTCTGCG TTTGAGCATG GTATTGTCTC GTTACAACAA TTTGAATTGT TGGCGGTCGC CATCAATACA GGGACCAACC TCCCCTCCGT GGCGACACCA AACGGCCAGG CCGCTTTCTT GTTCCTGCTG ACTTCGGCAT TGGCACCACT AATTCGCCTT TCCTATGGGC GAATGGTATA TATGGCTTTG CCTTATACTC TAGTGATGAC GATTGTTGGC CTGCTGGGTG TCGAGTTTTT ATTGGTACCG ATGACAGAGT GGCTGACTCA GGCTGGATGG ATCAGTTTGC CACACATCAC AAACGGGGTT GCCATCCCAC ACTGA
|
Protein sequence | MDITNRQAVL KNFLGNSPDW YKLAIMGFLI INPLVFFFVS PFVAGWMLVI EFIFTLAMAL KCYPLQPGGL LAIQAVAIGM TSPHQVAEEI ANNLEVLLLL VFMVAGIYFM KQLLLFVFTK LLLNIRSKTI LSLAFCLASA FLSAFLDALT VIAVVISVSV GFYTIYHNVT SNHSDKDITD DSGIDNQDSH ETLEQFRAFL RSLMMHAGVG TALGGVMTMV GEPQNLIIAK SAGWNFADFF IRMLPVTLPV FIFGLLVCLL VEKFKLFGYG AQLPERVRQV LTEYDQQASA KRTKQEKMKL IVQAIIGVWL VLALALHLAE VGLVGLSVII LATSFCGITN EHSLGKAFQE ALPFTALLTV FFAVVAVIIE QSLFTPIIQF VLQASPSAQL SLFYLFNGLL SSVSDNVFVG TVYINEARSA FEHGIVSLQQ FELLAVAINT GTNLPSVATP NGQAAFLFLL TSALAPLIRL SYGRMVYMAL PYTLVMTIVG LLGVEFLLVP MTEWLTQAGW ISLPHITNGV AIPH
|
| |