Gene YpsIP31758_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1990 
SymbolmipA 
ID5384302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2290294 
End bp2291064 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID640864974 
ProductMltA-interacting protein 
Protein accessionYP_001400963 
Protein GI153949500 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000189285 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG ATCGTAAAGA AATGAACCAA ATAAAAACGC TGGCGGCTTT AACGGTTGCA 
TTGGCTGTTT GCATGCCAAC CGCCAATGCG GGAAATTGGT CTCTGGGGGC TTCTGCATTA
GTCAGCCCGG ACCCTTACCG TGGCAAGAAT GATCGTGTCT ATCCCGTACC TGTTGTCTCT
TATGAGAGCG ATAATTTTTA CTTCCGAACG CTGGCAGCAG GTTATTACCT GTGGAACGAT
AGCAGTAATC GTTTATCCAT CGATGCTTTC TACTCACCAC TGCACTTCAA ACCCGGTGAC
AGTGACGATC AGCAGATGAA GCAACTCAAT AGACGTCGTA GCACCATGAT GGCAGGGATG
TCTTATTCTC ACATTGAGGA TTGGGGGACT CTGCGTGCGA TGTTTGCTGG TGATATATTG
GATAACAGTG ATGGTTTTGT CGGTGACTTA GCGTATTTGT ACCGCTTTAG CATTGATAGC
TGGACGTTAA CGCCGGGTGT CGGTGTGAGT TGGAGCAGCA AAGATCAGAA TAGCTATTAT
TATGGTGTGA GCCGTGGTGA GTCTGCGCGC AGTGGTTTGG CTGAATATAA CCCAAGCGAT
AGCTGGTCAC CGTATTTGGA GCTGTCTGCT AATTACAACA TCAATCCAAA TTGGAATGCT
TTCTTTACTG GCCGTTATAT CCGTCTGGCT AATGAAGTTA AAAACAGCCC AATGGTGGAT
CAATCATACA CTGGCGTGTT GTGGACAGGC GTTACCTATA CATTCCGCTA A
 
Protein sequence
MKKDRKEMNQ IKTLAALTVA LAVCMPTANA GNWSLGASAL VSPDPYRGKN DRVYPVPVVS 
YESDNFYFRT LAAGYYLWND SSNRLSIDAF YSPLHFKPGD SDDQQMKQLN RRRSTMMAGM
SYSHIEDWGT LRAMFAGDIL DNSDGFVGDL AYLYRFSIDS WTLTPGVGVS WSSKDQNSYY
YGVSRGESAR SGLAEYNPSD SWSPYLELSA NYNINPNWNA FFTGRYIRLA NEVKNSPMVD
QSYTGVLWTG VTYTFR