Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1989 |
Symbol | |
ID | 5386928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2289346 |
End bp | 2290221 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864973 |
Product | aldose 1-epimerase |
Protein accession | YP_001400962 |
Protein GI | 153947966 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000000239018 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGA AAGTATTTAC TCTCCCTGTT GTTGAACAAA TCTCTCCTTA TATCAGCCAG CGTCAACTGG ATGAATTACC GGTAGTGGTT GTTTCTCATC CTAAGGTGCG TGCGGCAATA AGTTTGCAGG GGGCCCACTT ACTGGCCTAT CAACCCAGTG GTGAGCAACC TATTATTTGG CTGAGCAATA ACACGCCGTT TAAAGAGGGT ATTGCGATTC GTGGAGGGGT TCCAATTTGT TGGCCTTGGT TTGGCCCAAC CGCACAACCT GCCCATGGTT TTGCCCGCAT CTTACCATGG ACACTCAGTG CTCATGATGA AAATGAAAAC GGCGTCATTC TGACTTTTAC CCTTGAAGAC AGCGACATGA CCCGCCAATA CTGGCCACAT GCCTTCACCC TGATCGCCCG TTTCAAGTTG GGAGATGAAT GTGAAGTTGA ACTGGAATCA CACGGTGATT ATCAGGCTGC TGCGGCATTA CATACCTACT TCCAGATTGG CGATATAAGC CACATTAAAG TCAGCGGGCT GGGTGAGAAA TATTTAGATA AAGTGCTGAA AGTTGCCGAT GTCACTCAAC AAGGCGATTT AGTCTTTAAC GGCCAAACTG ACCGTGTCTA TACCCAACCT GAAGCCTATA GTCTGATAAA AGATGCCGCG CTGAAACGAA CTATTGAGGT CCATCACCAT CACCAAAGTG ATGTGGTTGC CTGGAACCCC GGCGCTGAAT TGTCCTGCAG CATGGTAGAT ATGCCAAATG ATGGCTATAA AACGATGGTT TGCGTAGAAA CCGCACGAGT CAACAAGCCA TTGGTGGCTG CGCCTGATGC ACCAGCACGT TTGGCGATGA CCATCCGTAG CCGTAAAAAC ACCTAA
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Protein sequence | MNEKVFTLPV VEQISPYISQ RQLDELPVVV VSHPKVRAAI SLQGAHLLAY QPSGEQPIIW LSNNTPFKEG IAIRGGVPIC WPWFGPTAQP AHGFARILPW TLSAHDENEN GVILTFTLED SDMTRQYWPH AFTLIARFKL GDECEVELES HGDYQAAAAL HTYFQIGDIS HIKVSGLGEK YLDKVLKVAD VTQQGDLVFN GQTDRVYTQP EAYSLIKDAA LKRTIEVHHH HQSDVVAWNP GAELSCSMVD MPNDGYKTMV CVETARVNKP LVAAPDAPAR LAMTIRSRKN T
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