Gene YpsIP31758_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1921 
Symbol 
ID5384648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2224031 
End bp2224882 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content35% 
IMG OID640864905 
Producthypothetical protein 
Protein accessionYP_001400896 
Protein GI153949161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00560894 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCCTC GCCTCACTGA TTTTGTACCA CTCAGTATCC TTACACCGAT TAAAGATGAT 
GCTAAAGAAA TCCCTGTTGA ACCAAATGAT ATAACTATTG CTGTTAATAA TGCCGATAAG
GAGGAAAACA ATCCACAATA TGTGGTACTG GATAATGGAA TTAGACAAGC AATGATAGAT
AAAACCACAA ATCACTATGA TAAAGAGTCA CTTACTCACT TGGCCAGTAC CTATCCACTT
GTTGAAATCG GTGTGCGTGA TAGGTTACAG GAAATAAACT CACCACTGCA GTTTCCCTAT
TCTGTGGATA TTAATGTAGA AGATAAACCA GAAAATGGGG TAGTGATTCA TCAACATATT
GTTTATGCAT ATAGTTCTGG AGGCCATGGT AGTACAAGCA GTCCAGCTCA TAATTGTACT
CAAGTGAATA AACCACTTAT TGACATTTAT TGCCAGATTG ATGTGCCAGG GGATAATAAT
TTATTACACA ATCTGGATAT CAAGTTGTCT ATAAAACTCA ATGAAGAAGT TGGCTTCTCT
TTAAATAAAA TATTTAACCC TTATGACATT CTACGCAATA TATGGGGGAA TGTCATAAAA
CTATATGAAG AGAATAAAAT TGATAATAAC ATTACCGATT CAGATATCAA TTTTGATGAT
GACGAGTGGG TAAGTGATGA AGATATTGCC CTGTTGGCGG AGTTTTCTAA GCAAAAAAAT
AATATTGAAG AGCCACATAA AAAACTAGAG TTGGTATATC CAGAACATCA AGATTTTGAA
TGGGATGATA ATTTTGGACT GGATGACTAT TTCAAATCAG ATGCCGAGGA GGATGAGCTC
TCCTTACATT AA
 
Protein sequence
MFPRLTDFVP LSILTPIKDD AKEIPVEPND ITIAVNNADK EENNPQYVVL DNGIRQAMID 
KTTNHYDKES LTHLASTYPL VEIGVRDRLQ EINSPLQFPY SVDINVEDKP ENGVVIHQHI
VYAYSSGGHG STSSPAHNCT QVNKPLIDIY CQIDVPGDNN LLHNLDIKLS IKLNEEVGFS
LNKIFNPYDI LRNIWGNVIK LYEENKIDNN ITDSDINFDD DEWVSDEDIA LLAEFSKQKN
NIEEPHKKLE LVYPEHQDFE WDDNFGLDDY FKSDAEEDEL SLH