Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1921 |
Symbol | |
ID | 5384648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2224031 |
End bp | 2224882 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640864905 |
Product | hypothetical protein |
Protein accession | YP_001400896 |
Protein GI | 153949161 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00560894 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCCTC GCCTCACTGA TTTTGTACCA CTCAGTATCC TTACACCGAT TAAAGATGAT GCTAAAGAAA TCCCTGTTGA ACCAAATGAT ATAACTATTG CTGTTAATAA TGCCGATAAG GAGGAAAACA ATCCACAATA TGTGGTACTG GATAATGGAA TTAGACAAGC AATGATAGAT AAAACCACAA ATCACTATGA TAAAGAGTCA CTTACTCACT TGGCCAGTAC CTATCCACTT GTTGAAATCG GTGTGCGTGA TAGGTTACAG GAAATAAACT CACCACTGCA GTTTCCCTAT TCTGTGGATA TTAATGTAGA AGATAAACCA GAAAATGGGG TAGTGATTCA TCAACATATT GTTTATGCAT ATAGTTCTGG AGGCCATGGT AGTACAAGCA GTCCAGCTCA TAATTGTACT CAAGTGAATA AACCACTTAT TGACATTTAT TGCCAGATTG ATGTGCCAGG GGATAATAAT TTATTACACA ATCTGGATAT CAAGTTGTCT ATAAAACTCA ATGAAGAAGT TGGCTTCTCT TTAAATAAAA TATTTAACCC TTATGACATT CTACGCAATA TATGGGGGAA TGTCATAAAA CTATATGAAG AGAATAAAAT TGATAATAAC ATTACCGATT CAGATATCAA TTTTGATGAT GACGAGTGGG TAAGTGATGA AGATATTGCC CTGTTGGCGG AGTTTTCTAA GCAAAAAAAT AATATTGAAG AGCCACATAA AAAACTAGAG TTGGTATATC CAGAACATCA AGATTTTGAA TGGGATGATA ATTTTGGACT GGATGACTAT TTCAAATCAG ATGCCGAGGA GGATGAGCTC TCCTTACATT AA
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Protein sequence | MFPRLTDFVP LSILTPIKDD AKEIPVEPND ITIAVNNADK EENNPQYVVL DNGIRQAMID KTTNHYDKES LTHLASTYPL VEIGVRDRLQ EINSPLQFPY SVDINVEDKP ENGVVIHQHI VYAYSSGGHG STSSPAHNCT QVNKPLIDIY CQIDVPGDNN LLHNLDIKLS IKLNEEVGFS LNKIFNPYDI LRNIWGNVIK LYEENKIDNN ITDSDINFDD DEWVSDEDIA LLAEFSKQKN NIEEPHKKLE LVYPEHQDFE WDDNFGLDDY FKSDAEEDEL SLH
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