Gene YpsIP31758_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1915 
Symbol 
ID5384581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp2217306 
End bp2218475 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content49% 
IMG OID640864899 
Producttetratricopeptide repeat protein 
Protein accessionYP_001400890 
Protein GI153948939 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000000481977 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAA TGCTGTTTCT GCTGTTGCCC GTTGCTGCCG CCTATGGTTG GTATATGGGG 
CGCAGAAGCG CTCAGCAGGA TAAGCAACAG GATGCTAACC GCTTGTCACG TGAATACGTG 
GCTGGGGTTA ACTTCCTTCT CTCGAACCAG CAAGATAAAG CAGTCGATCT CTTCCTCGAA 
ATGTTGAAAG AAGACAGTTC TACGGTCGAG GCTCATCTTA CTCTGGGTAA TCTGTTCCGC 
TCACGCGGCG AAGTTGATCG CGCCATTCGC ATCCATCAAG CCTTGATGGA GAGTGCATCC 
CTGACATTTG AACAACGGCT ATTGGCTGTT CAGCAACTCG GTCGGGATTA CATGGCCGCA 
GGTTTATATG ATCGGGCAGA AGATATGTTC AACCAATTGG TTGAAGAGCA AGATTTTCGG 
CTCGGCGCAT TACAACAATT ACTGATAATT CATCAGGCAA CCAGTGATTG GCATAATGCT 
ATTGAAGTTG CGGAAAAATT GGTCAAGATG GGCAAAGATA ATCAGCGTCT GGAAATTGCG 
CACTTCTATT GTGAACTTGC GTTGCAAGCA ATGGGCAGTG ACGATCTGGA TAAGGCCATG 
GGGTTACTGA AAAAAGCGGC AACGGCGGAT AAACAATGTG CCCGAGTTTC TATTATGCGT 
GGCCGTGTGC ATCTCGCTAA AGGTGAGTAT GCCAAAGGCG TTGAAGCGTT GGAGCGAGTA 
CTGGAGCAAG ATAAAGAAGT CGTCAGTGAA GCATTACCGA TGCTCAGTGA ATGCTACCAA 
CACCTGCAAC AGCCCCAGGC TTGGGCTAAT TTCCTTAAAC GTTGTGTAGA AGATAATACC 
GGTGCGGCGG CTGAACTGAT GTTGGCGGAG GTCCTTGAAC AGCAGGAAGG CCATGATGTC 
GCGCAAACGT ATATTAACCG CCAATTACAG CGCCATCCAA CGATGCGCGG TTTTTATCGT 
CTAATGGATT ACCACTTAGC AGATGCAGAA GAAGGGCGTG CAAAAGAGAG TTTATTGCTA 
TTACGGGACA TGGTTGGTGA GCAAATTCGG ACCAAACCAC GTTACCGTTG CCATAAGTGT 
GGTTTCACCG CCCACTCACT CTATTGGCAT TGCCCGTCTT GCCGTGCCTG GGCATCAGTT 
AAGCCGATCA GAGGATTAGA TGGGCAGTAG
 
Protein sequence
MLEMLFLLLP VAAAYGWYMG RRSAQQDKQQ DANRLSREYV AGVNFLLSNQ QDKAVDLFLE 
MLKEDSSTVE AHLTLGNLFR SRGEVDRAIR IHQALMESAS LTFEQRLLAV QQLGRDYMAA 
GLYDRAEDMF NQLVEEQDFR LGALQQLLII HQATSDWHNA IEVAEKLVKM GKDNQRLEIA 
HFYCELALQA MGSDDLDKAM GLLKKAATAD KQCARVSIMR GRVHLAKGEY AKGVEALERV 
LEQDKEVVSE ALPMLSECYQ HLQQPQAWAN FLKRCVEDNT GAAAELMLAE VLEQQEGHDV 
AQTYINRQLQ RHPTMRGFYR LMDYHLADAE EGRAKESLLL LRDMVGEQIR TKPRYRCHKC 
GFTAHSLYWH CPSCRAWASV KPIRGLDGQ