Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1902 |
Symbol | |
ID | 5387836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2204646 |
End bp | 2205644 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864886 |
Product | NAD dependent epimerase/dehydratase family protein |
Protein accession | YP_001400877 |
Protein GI | 153947931 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0000745281 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTA TGATAACGGG GGCTGCCGGT TTTCTGGGGC GTCGATTGAT TGACGGCTTA CTGCAACAGG ATTATCTGAC TGATCAGCAG GGGGAGCCGC GCAATATCAA TAAAATCCTT GCCTATGATG TGCTTCCCTT GATGGAAGTA GAGGATCCAC GGGTTCAGGT TATTTGTGGT GACATTGCCG ATCAGAACGG ACTATCGGCG GTCTGGGATC GCCAAATTGA CACTATTTTC CATTTGGCAG CGGTTGTTTC CAGCCAGGCC GAAGACGATT TTGATTTAGG TATGCGCATT AACGTTGATG CCACTCGCAG CCTATTAGAA TTGGCTCGTC AGTCCGGCCA ATGCCCTAAA GTGATTATTA CCAGTTCTGT GGCGGTATTC GGCGGTGCAT TGCCGAAAGT TGTTCCTGAT AATCAGGTGT GGTCACCACA GAGTTCCTAT GGTACGCAAA AAGCATTAAA CGATTTATTG CTGTCTGATT ACAGCCGCCG TGGGTTTATT GATGGGCGCA GCCTGCGTAT GCCAACCATC GTGGTGAGAC CCGGTAAACC GAACCGCGCT GCCTCCAGTT TTGCCAGTGG CATTATCCGG GAACCTCTGC AAGGGCATGA TGCTATTTGC CCCGTCAGTA TGCAAACGCC GTTATGGTTA CTCTCACCCA AAATGGCGAT CGATAATTTG ATTCATGGCC ATGAACTGGA TGCTAGCCAA CTCCGCTTAG GGCGGGTGAT CAACTTGCCG GGGCTATCCG TTAGTGTACA GCAGATGATT GATGCTTTGC GCCGTCTCGC GGGTGATGAG GTCGTTGAAC GTATCCAAGT GCAGCGGGAC CCTTCGATCG AGAGAATTGT TAATTCCTGG CCAGGTGATT TTGAAGCCAG CTATGGGAAA GCATTAGGTT TTCGTCGCGA TCCGGATTTT GACAGTATTA TTCAGGATTT TATCATTGAG AATTTGCCTG AATTAGCGGC TGAGAAGCAC TTTATTTAG
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Protein sequence | MNIMITGAAG FLGRRLIDGL LQQDYLTDQQ GEPRNINKIL AYDVLPLMEV EDPRVQVICG DIADQNGLSA VWDRQIDTIF HLAAVVSSQA EDDFDLGMRI NVDATRSLLE LARQSGQCPK VIITSSVAVF GGALPKVVPD NQVWSPQSSY GTQKALNDLL LSDYSRRGFI DGRSLRMPTI VVRPGKPNRA ASSFASGIIR EPLQGHDAIC PVSMQTPLWL LSPKMAIDNL IHGHELDASQ LRLGRVINLP GLSVSVQQMI DALRRLAGDE VVERIQVQRD PSIERIVNSW PGDFEASYGK ALGFRRDPDF DSIIQDFIIE NLPELAAEKH FI
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