Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1896 |
Symbol | |
ID | 5387166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 2197811 |
End bp | 2199907 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640864880 |
Product | electron transport complex protein RnfC |
Protein accession | YP_001400871 |
Protein GI | 153947990 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.813056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGC TGTTTACTGC CCGCCAACAT GACAAGATCT GGGATTTCGA TGGCGGTATC CACCCACCAG AAATGAAACT GCAATCAAGC ACGGTCCCCA TGCGTATCGC GCCTTTGCCA GATCAATTAA TTATCCCTTT GCAACAGCAC TTGGGGCCGG AGGGTGAACT GCGGGTACGG GCGGGTGAGC AAGTATTGAA GGGGCAGCCA CTGACCGTTG GCCGTGGCCG TACAGTTCCA GTTCATGCCC CTACTTCAGG GATGATCACT GCGATTGCTC CACATACCAC CGCCCACCCA TCCGGCTTAG CTGAACTTTG CGTCCATATT ACCCCTGATG GTGAAGATCG CTGGCGTGAA CAACAGCCGT GGGCTGACTA TCGCCAGCGC GATAAAATGG CCCTGCTTGA CCGTATTCAC CAAGCAGGCA TTGCCGGTTT GGGGGGCGCA GGTTTCCCAA CTGCCAGCAA GCTGCAAGGG GGGTTGAATG GGATTATCAC GTTAATCATC AACGCGGCGG AATGCGAACC CTATATCACT GCTGATGATC GTTTGATGCA AGAGCATGCT GATGAAGTCA TAACGGGTAT CCATATTTTA CGGCATTTGT TGCAGCCTCA GCAGGTACTG ATTGGGATAG AAGATAATAA GCCAGAGGCG ATTGCGGCAC TGCAACGGGC ATTACGTGGG CAAGACGACA TTCACTTACG TGTTGTCCCC ACCAAGTACC CATCAGGGGG AGCCAAGCAA TTAACCAAGA TTCTGACGGG CAAAGAAGTC CCCTTTGGCA AGCATTCGTC ATCCATTGGT GTATTAATGC AAAACGTCGG TACTGTCGTG GCTATCAAAC GGGCAGTTAT CGACGATGAA CCACTGATTG AGCGGGTGGT GACATTAACC GGTGATGCCC TGTCATCGCC TGGAAACTTT TGGGCCAGAA TCGGCACACC AGTACTGTAT TTACTTAAAT TGGCCGGTTT CAAGCCTCAA AACCCGCCAA TGGTGATTAT GGGGGGGCCA TTGATGGGCT TTACTTTGCC CAGTTTGGAT GTCCCCATCG TTAAAATCAG TAACTGCATT TTAGCGCCCG CTGAAACGGA AATGGGCCTA TCTGAACCAG AGCAATCCTG TATCCGTTGC GGTTTATGTG TTGACGCCTG CCCTGCAGGA TTATTGCCTC AACAACTCTA CTGGTTTAGC CGTGGTGAAG AACACGAAAA GGCCCGCAAT CATAATTTGT TCGATTGTAT AGAATGCGGT GCCTGCGCCT ATGTTTGCCC CAGTAATATT CCTCTAGTGC AATATTACCG GCAAGAAAAA GCAGAAATAC GCGCCCTCGA TCAGGAGAGC GCTCGTGCAG CCGAAGCTAA AGCACGATTT GAAGCGAAGC AAGCCCGTCT GGCGCGGGAG AAGTTGGCCA GAGAATTACG GCATAAGCAA GCCGCTGTCA AATTGACCGA TGCTGATCAA CAAACAGTTG ACGCTGCTGT CAGTCGTTTG ACCCGCCAAT CTGATGGCTC AGAGTCTGTT ATCAATATCC CCGCAGGGCA AATGCCGGAT AACAGTGCAG TTATTGCCGC CCGTGAAGCC CGAAAAGCAC AGGCCAGAGC ACGGCAGGCA GAGAAACAGC AGGCACGATC AACGGAAGAA ACAACCGACG TTGTTGATCC TCGTCAAGCC GCAGTAGCCG CCGCTATCGC CAGAGTCAAA GCTAAGAAAG CCGCTCAGGT ACAACACGTT ACCACTGACG TGGCGGAGGC GGGATCAGAG GCCATAGCAG AAGACCCACG GAAAGCCGCA GTAGCCGCCG CTATTGCCAG AGTCAAAGCA AAGAAAGCCG CTCAGGCACA ACACGTTACC ACTGACGTGG CGGAAGCGGG ATCAGAGGCC ATGGCAGAAG ACCCACGGAA AGCCGCAGTA GCCGCCGCTA TTGCCAGAGT CAAAGCAAAG AAAGCCGCTC AGGCACAACA CGTTACCACT GACGTGGCGG AGGCGGGATC AGAGGCCATA GCAGAAGATC CACGGAAAGC CGCTGTGGCC GCCGCTATCG CCAGAGTCAA AGCCAAGAAA GCCGCTCAAG CGATAAATCC TGACTAA
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Protein sequence | MFKLFTARQH DKIWDFDGGI HPPEMKLQSS TVPMRIAPLP DQLIIPLQQH LGPEGELRVR AGEQVLKGQP LTVGRGRTVP VHAPTSGMIT AIAPHTTAHP SGLAELCVHI TPDGEDRWRE QQPWADYRQR DKMALLDRIH QAGIAGLGGA GFPTASKLQG GLNGIITLII NAAECEPYIT ADDRLMQEHA DEVITGIHIL RHLLQPQQVL IGIEDNKPEA IAALQRALRG QDDIHLRVVP TKYPSGGAKQ LTKILTGKEV PFGKHSSSIG VLMQNVGTVV AIKRAVIDDE PLIERVVTLT GDALSSPGNF WARIGTPVLY LLKLAGFKPQ NPPMVIMGGP LMGFTLPSLD VPIVKISNCI LAPAETEMGL SEPEQSCIRC GLCVDACPAG LLPQQLYWFS RGEEHEKARN HNLFDCIECG ACAYVCPSNI PLVQYYRQEK AEIRALDQES ARAAEAKARF EAKQARLARE KLARELRHKQ AAVKLTDADQ QTVDAAVSRL TRQSDGSESV INIPAGQMPD NSAVIAAREA RKAQARARQA EKQQARSTEE TTDVVDPRQA AVAAAIARVK AKKAAQVQHV TTDVAEAGSE AIAEDPRKAA VAAAIARVKA KKAAQAQHVT TDVAEAGSEA MAEDPRKAAV AAAIARVKAK KAAQAQHVTT DVAEAGSEAI AEDPRKAAVA AAIARVKAKK AAQAINPD
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