Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1891 |
Symbol | |
ID | 5387462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2193421 |
End bp | 2195568 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640864875 |
Product | toxin ABC transporter, ATP-binding/permease protein |
Protein accession | YP_001400866 |
Protein GI | 153947680 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATC ATGTTCATTC CGCGCTGATA TGTGCATCCA GATTGATTCG GTTGGCCGGG TTAAATCCAA TGGATATCGA GACATTTAGC CAAAAGGTCG CCATAGACAC CTCAGTAAAA ACAACGCTAG CGTCTCTTCA GCGTTATATC GTTCAATTTT CACAAACAGC TTCTGTCCGT TTTAAAATAC GTAAGCAAGC ATTGGAAAAA ATAAGGCAGG AGCAGTTACC GCTGGCATTT CGTGACCGTC AGGGGAATTT TATCTTGCTG GCGCGGATGA ATGAACAACA AGTGTTATTA CAGTACGCTG ATGATAAAAA ACCACAAATG TTAAGTTATC AATCACTTGC TGACATGTGG GGTGGAATGA TCTTATGCTG TAGTCATTCG CGCTTTGATA TTCGCTGGTT TATCCCGCCA CTACGTCGCC ATCGTAAGCC ATTAATGCAA GTCCTATTGT TATCATTATT GCTGCAATTC CTAGCGTTGA TCTCCCCTCT CTTTTTTCAA GTTATCATGG ACAAAGTACT CGTTCATCAT GCATTAACCA CACTGGAAGT GCTAATCTTC ATCTTAGTCA TTGTCGGTGT GTATGAGGTT ATATTAAAAG GCTTGCGAGA ATATATTTTT ACGCATACGA CAACACGAGT GGATATATTA TTAGGCGGGA AGTTGTTTCA ACATTTAATC AGGTTGCCGT TAAGTTACTT TAAACAACGT CATGTCGGTA ATATTGTTGC CAGAGTCCGT GAGTTAGATA ATATCCGTGA TTTCATCACG GGTTCGGCCC TGACATTATG TGTTGATGTG GTTTTTACCT TCGTGTTGTT TATTGTTATG TGGTGTATAT CCCCGTTATT AACCTTAATA ATACTGAGCA CGTTGCCTTT TTATCTGTTA TTGGCCGTGA TGACCACTCG GCCGTTGCAA AAAAAAGTGG AGGCTCTCTG TGGTTTTGCT GCGCAAAACG GCGCGTTTTT GACTGAAACG GTGTCTGGGG TGGAAACCGT AAAAAGTTTG GCGCTGGAGC CACGGATGCG CCAGCGCTGG GAAAGCCAAA CTCGTGATTT TGCTCAGGCT AATTTTCAGG TACAAAATTT GCAAAATCTC AGTAGCCAAG CGGCTCAACT CTTGCAAAAG GTGGCTGGCG CACTGGTGAT CGTGATAGGT GCGTATCACG TTATGTCTGT ACAGCTCAGT ATTGGTCAGT TGATTGCATT TAATATGTTG GCACTACAGG CATTAATGCC GATGAGTAAA CTGGTTGATT TATGGCAGCA GAGCATCCGT GCGCAGGTTG GGCTGAAATT AATATCAGAT ATTCTAAGCT TGCCGGTTGA ACCGGAGGCA GATCCGGCGG CCCCGCACCC TGCGATTAGC GGCAATATCC TACTAAAAAA TGTGGCCTTC CGTTATCGCC CCGATCTTGA TCCTGTCTTA CATGATTTAA ACTTATCTAT CCGCGCGGGT GAACATATCG GGTTGGTGGG GCCGTCAGGA TCGGGGAAAA GCACCGTGGC CCGGTTATTA CAACGGCTCT ATAACACCGA ACAAGGGGTC ATTACGATAG ATGGTTATCC GATCAACCAT TTATCACCAG AATATTTACG GCGACAAGTG GGGGTGGTGA TGCAGGAAAG CTATCTGTTT AACCGCACCG TGCGAGAAAA TATTGCCCAT TCACGGCCAA CAGCCACCTT GACCGAGGTG GTCAATGCCG CCAGTTTAGC GGGTGCTAAC GCCTTTATTT TGGCGCTACC TTTAGGGTAT GACACGGTTT TATCTGAAGG TGGTTCATCC TTATCTGGTG GGCAACGTCA ACGTATTGCC ATTGCTCGCA CTCTGCTCGC GAATCCCCGG ATCTTAATTT TTGATGAAGC GACCAGCGCA CTGGATGATG AGTCTCAGTC GGAGATTCAG AAAAACATGG CCCGCATTAT CGCCAATCGC ACGGTTATTA CGATTGCCCA TCGCCTATCG ACCGTTCGTC ACTGCCACCG TATTGCCGTG ATAACACAAG GCCGAGTCAC CGAACTTGCC AGCCATGACG AATTACTGCA ATTAAACGGC AGTTACGCTC GGCTTTGGCA ACAACAAGTT CATTTTAACC AAAACAAGTC CACTTTAACT AAAACAAGTC CACCTTAA
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Protein sequence | MENHVHSALI CASRLIRLAG LNPMDIETFS QKVAIDTSVK TTLASLQRYI VQFSQTASVR FKIRKQALEK IRQEQLPLAF RDRQGNFILL ARMNEQQVLL QYADDKKPQM LSYQSLADMW GGMILCCSHS RFDIRWFIPP LRRHRKPLMQ VLLLSLLLQF LALISPLFFQ VIMDKVLVHH ALTTLEVLIF ILVIVGVYEV ILKGLREYIF THTTTRVDIL LGGKLFQHLI RLPLSYFKQR HVGNIVARVR ELDNIRDFIT GSALTLCVDV VFTFVLFIVM WCISPLLTLI ILSTLPFYLL LAVMTTRPLQ KKVEALCGFA AQNGAFLTET VSGVETVKSL ALEPRMRQRW ESQTRDFAQA NFQVQNLQNL SSQAAQLLQK VAGALVIVIG AYHVMSVQLS IGQLIAFNML ALQALMPMSK LVDLWQQSIR AQVGLKLISD ILSLPVEPEA DPAAPHPAIS GNILLKNVAF RYRPDLDPVL HDLNLSIRAG EHIGLVGPSG SGKSTVARLL QRLYNTEQGV ITIDGYPINH LSPEYLRRQV GVVMQESYLF NRTVRENIAH SRPTATLTEV VNAASLAGAN AFILALPLGY DTVLSEGGSS LSGGQRQRIA IARTLLANPR ILIFDEATSA LDDESQSEIQ KNMARIIANR TVITIAHRLS TVRHCHRIAV ITQGRVTELA SHDELLQLNG SYARLWQQQV HFNQNKSTLT KTSPP
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