Gene YpsIP31758_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1869 
Symbolmlc 
ID5387513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2164724 
End bp2165941 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content47% 
IMG OID640864853 
ProductMlc protein 
Protein accessionYP_001400844 
Protein GI153950472 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0472832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAATGG ATGGACAGCC TGGACATATT GATCAGATCA AACAAACCAA TGTAGGGGCC 
GTTTATCGGC TAATTGATCT TTTGGGGCCG ATATCCCGTA TTGAACTCTC CAAGCGGGCC
CAATTAGCGC CCGCCAGCAT CACTAAAATT GTGCGAGAAT TGGTCGAAGT TCATCTGGTA
AAAGAAACTG AATATCAAGA TGTAGGAAGC CGAGGTAGAC CTGCTATTGG GTTAGTCTTG
GATACCGAGG CTTGGCACTA TGTTTCCGGG CGTATCAGCC GTGGAACGAT AACACTGGCA
CTGCGCGACC TTAGCAGCAA ACTGGTGGTT GAAGAACAAA TTCCGCTGCC AGACCGCCAC
CCCGAGCCAC TGCTGAGCCG TATCCTTAAC GAGGTTGACC AGTTTTTTAT TCGCCATCAG
AAAAAACTCG AACGGCTCAC CGCGATTGCT ATTACGATGC CAGGCATCAT CGATGCACCT
GCGGGTATTG TGCATAAAAT GCCATTTTAT GATGTTAATG AAATGTCACT TGGGCCTGCG
TTGGAGCAAC GCACCGGTTT ACCTGTCTAT CTGCAGCATG ATATTTGCGC ATGGACCATG
GCAGAGTCGC TATATGGTGC CTCACGCGGT TGCCAGAATA TCATTCAAGT CGTTATTGAC
CATAATGTCG GGGCCGGTGT TATCACCTCT GGGCGGGTAT TACATGCTGG GAGTCGCAGT
GTCGTTAATA TTGGCCATAC TCAGGTTGAC CCCTATGGTA AACGCTGCTA TTGCGGCAAT
CATGGCTGTT TGGAAACCGT TGCCAGTATC GATAATATGT TGGCGATTGC TCAACAACGA
TTAAACAGTT CAATGAGTTC GCTGTTGCAC CATACACCTC TCAGTGTTGA GTCGCTTTGT
GATGCGGCGT TAGCCGGTGA CCAATTAGCC AAAGATATTA TTCTGGGTGT AGGTCATAGT
GTCGGGCGAA TTATTGCCAT TATGGTCAAT TTATTTAATC CAGAGAAAAT TCTGGTCGGG
TCGCCATTGA ATAAAGCATC ATCTATTTTG CACCCGGCAA TTGCCTCTTG TATTCGTCAA
CAAGCATTGC CCGCATATAG CGAGAATATT CTTGTTGAAT CAACCGAATT TTTTAATCAA
GGTACAATGC CTGGCGCAGC ATTAGTCAAA GAGGCATTAT ACAATGGCTC ATTATTAGTG
AAGTTGCTTC AAGGCTAG
 
Protein sequence
MIMDGQPGHI DQIKQTNVGA VYRLIDLLGP ISRIELSKRA QLAPASITKI VRELVEVHLV 
KETEYQDVGS RGRPAIGLVL DTEAWHYVSG RISRGTITLA LRDLSSKLVV EEQIPLPDRH
PEPLLSRILN EVDQFFIRHQ KKLERLTAIA ITMPGIIDAP AGIVHKMPFY DVNEMSLGPA
LEQRTGLPVY LQHDICAWTM AESLYGASRG CQNIIQVVID HNVGAGVITS GRVLHAGSRS
VVNIGHTQVD PYGKRCYCGN HGCLETVASI DNMLAIAQQR LNSSMSSLLH HTPLSVESLC
DAALAGDQLA KDIILGVGHS VGRIIAIMVN LFNPEKILVG SPLNKASSIL HPAIASCIRQ
QALPAYSENI LVESTEFFNQ GTMPGAALVK EALYNGSLLV KLLQG